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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 3
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 85.8 89.61
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 79.26 76.44
Bra033290.1-P Field mustard plasma membrane 75.57 74.93
CDY15204 Canola plasma membrane 75.57 73.28
CDX90005 Canola plasma membrane 75.57 73.28
Bra032617.1-P Field mustard plasma membrane 74.43 72.58
CDY32447 Canola plasma membrane 61.08 71.67
CDY55329 Canola plasma membrane 73.01 71.19
AT4G01430.1 Thale cress plasma membrane 66.76 64.38
AT4G01440.1 Thale cress plasma membrane 48.01 46.3
AT4G01450.2 Thale cress plasma membrane 47.44 46.26
Solyc04g007590.1.1 Tomato nucleus 38.92 39.48
VIT_01s0010g03450.t01 Wine grape plasma membrane 39.49 38.4
VIT_01s0010g03480.t01 Wine grape plasma membrane 39.49 38.4
KRH04198 Soybean extracellular, plasma membrane, vacuole 26.99 37.85
KRG90631 Soybean plasma membrane 36.65 37.28
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 36.65 37.18
AT3G30340.1 Thale cress plasma membrane 37.78 36.54
KRH40897 Soybean plasma membrane 38.92 35.77
KRG89109 Soybean plasma membrane 38.64 35.51
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 32.1 34.88
PGSC0003DMT400015286 Potato plasma membrane 36.08 34.51
EER87705 Sorghum plasma membrane 35.8 34.33
TraesCS6D01G009900.2 Wheat plasma membrane 34.09 34.29
TraesCS6A01G008700.1 Wheat plasma membrane 34.09 34.29
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 34.38 33.89
HORVU6Hr1G000500.17 Barley plasma membrane 34.09 33.33
Os06t0109300-01 Rice golgi, plasma membrane 34.09 33.33
Zm00001d054085_P001 Maize plasma membrane 32.67 33.24
TraesCS1B01G041700.1 Wheat plasma membrane 30.11 33.23
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 16.76 33.15
Os06t0107600-01 Rice plasma membrane 34.09 33.06
HORVU7Hr1G019700.4 Barley plasma membrane 33.52 33.05
OQU75691 Sorghum plasma membrane 33.24 33.05
TraesCS4B01G086600.1 Wheat plasma membrane 33.24 32.96
HORVU7Hr1G002200.2 Barley plasma membrane 34.38 32.88
GSMUA_Achr1P06340_001 Banana extracellular, golgi 32.95 32.86
TraesCS7D01G082900.1 Wheat plasma membrane 33.24 32.77
TraesCS7A01G020400.1 Wheat plasma membrane 34.38 32.61
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 34.38 32.61
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 16.48 32.58
TraesCS7D01G022800.1 Wheat plasma membrane 33.81 32.51
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 32.1 32.29
Zm00001d054081_P001 Maize plasma membrane 32.1 32.29
TraesCS6B01G015400.1 Wheat plasma membrane 31.82 32.28
TraesCS5D01G021800.1 Wheat plasma membrane 30.4 32.23
TraesCS7A01G024900.1 Wheat plasma membrane 33.52 32.15
TraesCS6D01G044200.1 Wheat plasma membrane 30.11 32.12
TraesCS5A01G015800.1 Wheat plasma membrane 30.11 32.12
TraesCS4A01G464100.1 Wheat plasma membrane 33.81 32.08
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 31.82 32.0
TraesCS6A01G008800.2 Wheat plasma membrane 31.82 31.91
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 34.09 31.83
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 31.82 31.82
TraesCS4A01G472400.1 Wheat plasma membrane 33.81 31.57
TraesCS6D01G009800.1 Wheat plasma membrane 31.53 31.53
EES04319 Sorghum extracellular, golgi, plasma membrane 32.39 31.41
Os04t0422300-01 Rice plasma membrane 33.24 31.28
OQU84142 Sorghum plasma membrane 33.24 31.2
Zm00001d045576_P001 Maize plasma membrane 34.94 30.98
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 31.82 30.85
TraesCS5B01G014100.1 Wheat plasma membrane 30.4 30.75
TraesCS6B01G014700.1 Wheat plasma membrane 30.68 30.51
TraesCS6D01G012400.1 Wheat plasma membrane 30.4 30.23
HORVU6Hr1G000600.1 Barley plasma membrane 30.4 30.06
TraesCS6A01G009400.1 Wheat plasma membrane 30.11 29.94
TraesCS6B01G015700.1 Wheat plasma membrane 29.83 29.58
TraesCS7A01G087800.1 Wheat plasma membrane 33.24 29.03
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 30.68 28.88
TraesCS4A01G386700.1 Wheat plasma membrane 32.95 28.71
TraesCS6A01G038300.1 Wheat plasma membrane 19.32 28.1
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 21.59 27.94
AT1G68170.2 Thale cress plasma membrane 28.98 27.87
AT1G25270.1 Thale cress plasma membrane 26.99 26.76
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 19.32 26.05
TraesCS4D01G164600.1 Wheat plasma membrane 20.17 25.91
HORVU5Hr1G067230.40 Barley mitochondrion 33.52 23.37
HORVU5Hr1G002470.1 Barley golgi 14.49 20.48
GSMUA_Achr7P17540_001 Banana plasma membrane 32.39 19.96
Os06t0109200-01 Rice plasma membrane 17.61 17.32
Zm00001d045567_P001 Maize plasma membrane 32.67 14.97
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5EntrezGene:837687UniProt:A0A178WNM5ProteinID:AAF16630.1ProteinID:AEE28737.1ProteinID:AEE28738.1
EMBL:AK227720ProteinID:ANM57690.1ProteinID:ANM57691.1ArrayExpress:AT1G11450EnsemblPlantsGene:AT1G11450RefSeq:AT1G11450
TAIR:AT1G11450RefSeq:AT1G11450-TAIR-GEnsemblPlants:AT1G11450.3Unigene:At.42131EMBL:BT022073EMBL:BT023478
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
RefSeq:NP_001077514.1RefSeq:NP_001320179.1RefSeq:NP_001320180.1RefSeq:NP_172612.2ProteinID:OAP19824.1PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF10UniProt:Q500Z4SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0000162D1D
InterPro:WAT1-relatedSEG:seg::::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNM5]
Coordinates
chr1:+:3853184..3855507
Molecular Weight (calculated)
38637.4 Da
IEP (calculated)
9.443
GRAVY (calculated)
0.698
Length
352 amino acids
Sequence
(BLAST)
001: MGEDMRGVKV VSKWPPMIVM VTSQVAMGSV NALVKKALDV GVNHMIIGAY RMAISSFILV PIAYFLERKI IPKITFRLMV DHFISGLLGA SLMQFFYLLG
101: LSYTSATVAC ALVSLMPAIT FAFALILRTE KIKDLKTQAG MIKVMGTLIC ISGALFLTFY KGPHISNSHS HLEALPHNNS DHNTKNWLLG CLYLVIGIVL
201: LSLWILFQGT LSIKYPCKFS STCLMSIFAA FQCALLSLYK SRDLKHWIID DGFVIGVIIY AGVIGQAMST VAATWGINRL GAVFASAIMP VSLISATLFD
301: FLILHTPLYL GSVIGSVGTI IGLYVFLWGK NKETEADITT LSSRMNNEDQ RV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.