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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d054081_P001 Maize plasma membrane 67.91 72.57
EES04319 Sorghum extracellular, golgi, plasma membrane 67.38 69.42
TraesCS6B01G015700.1 Wheat plasma membrane 62.3 65.63
TraesCS6A01G009400.1 Wheat plasma membrane 62.03 65.54
TraesCS6B01G014700.1 Wheat plasma membrane 61.76 65.25
TraesCS6D01G012400.1 Wheat plasma membrane 61.5 64.97
TraesCS5D01G021800.1 Wheat plasma membrane 57.49 64.76
TraesCS5A01G015800.1 Wheat plasma membrane 56.68 64.24
HORVU6Hr1G000600.1 Barley plasma membrane 60.96 64.04
TraesCS1B01G041700.1 Wheat plasma membrane 54.55 63.95
TraesCS5B01G014100.1 Wheat plasma membrane 58.82 63.22
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 52.14 60.19
TraesCS6D01G044200.1 Wheat plasma membrane 51.87 58.79
TraesCS6A01G038300.1 Wheat plasma membrane 37.7 58.26
GSMUA_Achr1P06340_001 Banana extracellular, golgi 54.81 58.07
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 26.2 55.06
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 26.2 55.06
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 47.86 48.64
HORVU5Hr1G002470.1 Barley golgi 32.35 48.59
KRH58997 Soybean plasma membrane 44.65 46.78
KRH11051 Soybean plasma membrane 46.52 46.52
Os06t0109300-01 Rice golgi, plasma membrane 44.65 46.39
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 46.26 45.89
VIT_01s0010g03480.t01 Wine grape plasma membrane 44.38 45.86
VIT_01s0010g03450.t01 Wine grape plasma membrane 44.12 45.58
Os06t0107600-01 Rice plasma membrane 44.12 45.45
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 31.55 45.21
Solyc12g099580.1.1 Tomato plasma membrane 43.32 45.0
PGSC0003DMT400011804 Potato plasma membrane 43.05 44.72
PGSC0003DMT400029440 Potato plasma membrane 28.07 44.12
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.64 43.8
Solyc04g007590.1.1 Tomato nucleus 40.64 43.8
KRG90631 Soybean plasma membrane 40.37 43.64
KRH42891 Soybean plasma membrane 44.12 41.88
KRG89109 Soybean plasma membrane 41.98 40.99
KRH40897 Soybean plasma membrane 41.71 40.73
Solyc01g066850.2.1 Tomato plasma membrane 42.78 40.61
CDY35779 Canola plasma membrane 39.04 40.22
CDY66443 Canola plasma membrane 38.24 39.39
CDY45904 Canola plasma membrane 37.97 39.12
AT3G30340.1 Thale cress plasma membrane 37.97 39.01
PGSC0003DMT400015286 Potato plasma membrane 38.24 38.86
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 21.66 38.76
Bra037413.1-P Field mustard plasma membrane 36.9 38.02
CDY51711 Canola plasma membrane 36.9 38.02
KRH04198 Soybean extracellular, plasma membrane, vacuole 25.4 37.85
AT4G01440.1 Thale cress plasma membrane 36.9 37.81
CDY07144 Canola plasma membrane 36.63 37.64
CDY60103 Canola plasma membrane 10.7 37.04
Os01t0297700-01 Rice plasma membrane 37.17 36.77
CDY69734 Canola plasma membrane 29.41 36.67
Bra000926.1-P Field mustard plasma membrane 31.82 36.39
Bra033290.1-P Field mustard plasma membrane 34.22 36.06
CDY32447 Canola plasma membrane 28.88 36.0
CDX91849 Canola plasma membrane 34.76 35.91
CDX90005 Canola plasma membrane 34.76 35.81
Bra000923.1-P Field mustard plasma membrane 34.22 35.65
Bra029909.1-P Field mustard plasma membrane 24.06 35.57
CDY15204 Canola plasma membrane 34.49 35.54
CDX74381 Canola plasma membrane 34.49 35.44
CDX83041 Canola plasma membrane 30.48 35.4
CDX97249 Canola plasma membrane 34.22 35.36
AT4G01450.2 Thale cress plasma membrane 33.96 35.18
CDX74385 Canola plasma membrane 33.96 35.08
CDY01936 Canola plasma membrane 33.96 35.08
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 34.22 35.07
GSMUA_Achr7P17540_001 Banana plasma membrane 53.48 35.03
Bra032617.1-P Field mustard plasma membrane 33.69 34.9
CDX68485 Canola plasma membrane 29.95 34.89
Bra008548.1-P Field mustard extracellular, plasma membrane 32.09 34.38
CDY55329 Canola plasma membrane 33.16 34.35
CDY70787 Canola golgi, plasma membrane 23.26 34.12
CDX91847 Canola plasma membrane 32.35 33.89
Bra000925.1-P Field mustard plasma membrane 31.02 33.82
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 30.21 33.53
Bra036199.1-P Field mustard plasma membrane 35.83 33.42
CDX97247 Canola plasma membrane 32.09 33.24
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 31.28 33.24
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 24.33 33.21
CDX97244 Canola endoplasmic reticulum, plasma membrane 24.33 33.21
AT4G01430.1 Thale cress plasma membrane 32.35 33.15
CDX91850 Canola plasma membrane 26.2 33.0
CDY70635 Canola plasma membrane 22.19 32.94
Bra020740.1-P Field mustard extracellular 17.65 32.67
Bra032618.1-P Field mustard plasma membrane 31.28 31.79
CDY32446 Canola plasma membrane 31.28 31.79
CDY37472 Canola cytosol, golgi, plasma membrane 31.02 31.52
Os04t0687800-01 Rice plasma membrane 34.49 31.31
Os10t0199500-01 Rice golgi, plasma membrane, vacuole 17.11 27.95
CDX97245 Canola plastid 8.29 27.68
Os08t0402800-01 Rice golgi, plasma membrane, vacuole 25.4 27.38
Bra008546.1-P Field mustard cytosol, extracellular, plastid 16.84 27.16
Os10t0163130-01 Rice plasma membrane 26.47 26.9
Os06t0109200-01 Rice plasma membrane 24.87 25.98
Os12t0288000-02 Rice golgi, plasma membrane 27.01 25.77
Os10t0198900-00 Rice plasma membrane 23.53 24.58
CDX86350 Canola plasma membrane 38.24 23.56
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 46.26 23.47
Os10t0197700-00 Rice plasma membrane 23.8 21.34
Os05t0357500-00 Rice cytosol 18.45 17.78
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5EntrezGene:4335836EMBL:AK107131ProteinID:BAF14703.1ProteinID:BAS89204.1ProteinID:EEE60996.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:Os04g0422300EnsemblPlants:Os04t0422300-01PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF10UniProt:Q0JD84
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0000DD9096InterPro:WAT1-relatedRefSeq:XP_015635148.1SEG:seg
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os04t0422300-01)
Coordinates
chr4:-:20882277..20885593
Molecular Weight (calculated)
40130.8 Da
IEP (calculated)
10.110
GRAVY (calculated)
0.697
Length
374 amino acids
Sequence
(BLAST)
001: MGSCNSWKPT LTMVGVVVVF AVMNTLIKMA LNEGMHATVL ITLRQLIATL FLAPIAYFRE RKTRPKLTAE ILVYLFFSAV LGASLTQWLF FLGLQYTTAT
101: FACAFINMTP IFTFLVALPY GLEKVNLNIA GIAKVGGTVL GFSGAMVLAL YQGPSLTKLS SSSSSSSSSS SPMASAAVIA AGHVGGAHRW AIGSVALLGG
201: SACWSLWFIL QSRIARKYPA LYSGTALMFF LSFLQMAVVA LAIDRVSLPP WILRTKLQII TVLFVGIVGS GIGFLAMSWC VEQRGPVFTT AFTPLIQIIA
301: AAINVIVLRE QLHLGTVIGS ALVIMGLYFV LWGKSKEASP SSSSSHPAKE AVPVLQQQHG HDDQETTNVQ MQTV
Best Arabidopsis Sequence Match ( AT4G01440.1 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.