Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0199500-01 | Rice | golgi, plasma membrane, vacuole | 47.55 | 72.05 |
| TraesCS7D01G104600.1 | Wheat | extracellular, golgi, plasma membrane | 50.14 | 71.6 |
| TraesCS7D01G104900.1 | Wheat | extracellular, golgi, plasma membrane | 65.42 | 71.38 |
| TraesCS7B01G007600.1 | Wheat | extracellular, golgi, plasma membrane | 65.42 | 71.38 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 68.01 | 69.62 |
| TraesCS5D01G482100.1 | Wheat | plasma membrane | 66.28 | 69.07 |
| TraesCS7D01G104700.1 | Wheat | plasma membrane | 68.3 | 67.91 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 68.3 | 67.91 |
| TraesCS7B01G007400.1 | Wheat | plasma membrane | 68.01 | 67.62 |
| HORVU7Hr1G023010.2 | Barley | plasma membrane | 67.15 | 67.54 |
| TraesCS7D01G104500.1 | Wheat | extracellular, golgi, vacuole | 57.06 | 67.12 |
| Os10t0198900-00 | Rice | plasma membrane | 68.88 | 66.76 |
| TraesCS7B01G007300.1 | Wheat | golgi, plasma membrane, vacuole | 64.55 | 66.27 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 40.35 | 65.73 |
| Zm00001d007263_P001 | Maize | peroxisome | 61.96 | 60.73 |
| OQU83175 | Sorghum | golgi, peroxisome, plasma membrane | 61.96 | 59.89 |
| HORVU7Hr1G023000.2 | Barley | golgi | 47.26 | 56.94 |
| KRH16968 | Soybean | plasma membrane | 38.04 | 40.74 |
| Os10t0163130-01 | Rice | plasma membrane | 40.63 | 38.32 |
| Os12t0288000-02 | Rice | golgi, plasma membrane | 42.36 | 37.5 |
| KRH53654 | Soybean | plasma membrane | 40.06 | 37.17 |
| Os10t0197700-00 | Rice | plasma membrane | 42.94 | 35.73 |
| KRH72599 | Soybean | plasma membrane | 39.19 | 35.51 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 39.77 | 35.11 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 30.55 | 34.87 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 38.62 | 34.45 |
| KRH38008 | Soybean | plasma membrane | 27.38 | 30.74 |
| Os06t0109300-01 | Rice | golgi, plasma membrane | 29.97 | 28.89 |
| Os01t0297700-01 | Rice | plasma membrane | 31.41 | 28.84 |
| Os04t0687800-01 | Rice | plasma membrane | 32.85 | 27.67 |
| Os06t0107600-01 | Rice | plasma membrane | 27.95 | 26.72 |
| Os04t0422300-01 | Rice | plasma membrane | 27.38 | 25.4 |
| Os02t0103500-00 | Rice | endoplasmic reticulum, plasma membrane | 27.09 | 24.93 |
| Os05t0357500-00 | Rice | cytosol | 25.07 | 22.42 |
| Os06t0109200-01 | Rice | plasma membrane | 13.83 | 13.41 |
| Os02t0103700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:4345517 | EMBL:AK070604 | ProteinID:BAC98693.1 | ProteinID:BAF23675.1 | ProteinID:BAT05352.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| EnsemblPlantsGene:Os08g0402800 | EnsemblPlants:Os08t0402800-01 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF132 | UniProt:Q6Z275 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00001D6C16 | InterPro:WAT1-related | RefSeq:XP_015649001.1 | SEG:seg |
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os08t0402800-01)
Coordinates
chr8:-:19222064..19227521
Molecular Weight (calculated)
38068.4 Da
IEP (calculated)
10.173
GRAVY (calculated)
0.697
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MDITGAGAMG GGSTAATAAA AAGAGWKTPV SMVLVQLFIT GQILLSKVSI GGGMLIFVLL AYNSFFAVVF LLPFALIFER GKWRDMDWGA FGWIFLNAFI
101: GYSVPMSLYY YGLKDTTSSY SVIFLNITPL FTFILSLMFR LEAFKLRSIP GVLKIASILL SIGGTMLISL YKGKSLHLWD SIIQHQNEHK SATNQLRGTI
201: LLVGSSFTFA CWFLIQSKIL KVYPYKYWSS MVTCLVGVFQ TALVGIILRR DKSAWELGWN LNLVTIVYTG ALATAGKYIL NSWAITKRGP TYPTMFSPLS
301: VVFTVVLDSV LLGNDITIGS LLGTALVIVG LYLFLWAKAR EIPKKST
101: GYSVPMSLYY YGLKDTTSSY SVIFLNITPL FTFILSLMFR LEAFKLRSIP GVLKIASILL SIGGTMLISL YKGKSLHLWD SIIQHQNEHK SATNQLRGTI
201: LLVGSSFTFA CWFLIQSKIL KVYPYKYWSS MVTCLVGVFQ TALVGIILRR DKSAWELGWN LNLVTIVYTG ALATAGKYIL NSWAITKRGP TYPTMFSPLS
301: VVFTVVLDSV LLGNDITIGS LLGTALVIVG LYLFLWAKAR EIPKKST
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.