Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G028400.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 53.26 | 67.59 |
| TraesCS4A01G284700.1 | Wheat | extracellular, golgi, plasma membrane | 59.51 | 61.17 |
| Os12t0288000-02 | Rice | golgi, plasma membrane | 51.36 | 48.21 |
| KRH53654 | Soybean | plasma membrane | 41.3 | 40.64 |
| Os08t0402800-01 | Rice | golgi, plasma membrane, vacuole | 38.32 | 40.63 |
| KRH16968 | Soybean | plasma membrane | 34.51 | 39.2 |
| KRH72599 | Soybean | plasma membrane | 39.67 | 38.12 |
| Os10t0199500-01 | Rice | golgi, plasma membrane, vacuole | 23.37 | 37.55 |
| Os10t0198900-00 | Rice | plasma membrane | 36.41 | 37.43 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 39.4 | 36.9 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 30.43 | 36.84 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 37.23 | 35.22 |
| Os10t0197700-00 | Rice | plasma membrane | 36.68 | 32.37 |
| Os05t0357500-00 | Rice | cytosol | 33.97 | 32.22 |
| KRH38008 | Soybean | plasma membrane | 26.36 | 31.39 |
| Os01t0297700-01 | Rice | plasma membrane | 30.98 | 30.16 |
| Os04t0687800-01 | Rice | plasma membrane | 32.61 | 29.13 |
| Os06t0107600-01 | Rice | plasma membrane | 26.9 | 27.27 |
| Os06t0109300-01 | Rice | golgi, plasma membrane | 26.09 | 26.67 |
| Os04t0422300-01 | Rice | plasma membrane | 26.9 | 26.47 |
| Os02t0103500-00 | Rice | endoplasmic reticulum, plasma membrane | 26.9 | 26.26 |
| Os06t0109200-01 | Rice | plasma membrane | 12.77 | 13.13 |
| Os02t0103700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:107275824 | MapMan:24.2.1.5 | ProteinID:ABG65925.1 | ProteinID:BAT10017.1 | InterPro:EamA_dom | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:Os10g0163130 | EnsemblPlants:Os10t0163130-01 | PFAM:PF00892 | PANTHER:PTHR31218 |
| PANTHER:PTHR31218:SF130 | UniProt:Q10A36 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0000DB4F34 | InterPro:WAT1-related |
| RefSeq:XP_015613901.1 | SEG:seg | : | : | : | : |
Description
Similar to Integral membrane protein DUF6 containing protein, expressed. (Os10t0163130-01)
Coordinates
chr10:-:4290772..4294905
Molecular Weight (calculated)
40153.1 Da
IEP (calculated)
9.742
GRAVY (calculated)
0.710
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEIIPDGG GGGAVLAAES VMLPASMVLV QLFSVVLVLL SKLALSTGMR PFALLAYRNL VGAVAVAPLA FIFERKNRKI PSIVEWCWIS LNATFGVILS
101: MGLYYYGLRS TSATYSVIFL NLIPIVTSII AIIFGAEKLV FTDWPGKIKL FGIITCVGGT MVVSLYKGKL LHHPWPSHLL KFHTQKASGY AYHHNLLAGT
201: LFLCGSCLSY AFWFIIQVRL ASVFPYRYWA TTLTCLSGSL QAFVIGILIS PTKSAWTLKW DMQLLTVVYS GVFNTGISFV LMSLAVKHRG PIYPSMFNSL
301: SLIVMVIMDS VLLGTSIFLG SILGTAFIIV GLNAFLWGKG KELKQAVAQH TSHKQNTDHN EQVGDEIA
101: MGLYYYGLRS TSATYSVIFL NLIPIVTSII AIIFGAEKLV FTDWPGKIKL FGIITCVGGT MVVSLYKGKL LHHPWPSHLL KFHTQKASGY AYHHNLLAGT
201: LFLCGSCLSY AFWFIIQVRL ASVFPYRYWA TTLTCLSGSL QAFVIGILIS PTKSAWTLKW DMQLLTVVYS GVFNTGISFV LMSLAVKHRG PIYPSMFNSL
301: SLIVMVIMDS VLLGTSIFLG SILGTAFIIV GLNAFLWGKG KELKQAVAQH TSHKQNTDHN EQVGDEIA
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.