Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 40.78 41.71
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 40.5 41.43
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 39.94 40.62
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 40.5 39.94
OQU75691 Sorghum plasma membrane 39.11 39.55
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 20.95 35.89
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 32.4 30.77
PGSC0003DMT400029440 Potato plasma membrane 18.44 27.73
Bra029909.1-P Field mustard plasma membrane 18.72 26.48
Os06t0107600-01 Rice plasma membrane 26.82 26.45
Os06t0109300-01 Rice golgi, plasma membrane 25.7 25.56
KRH58997 Soybean plasma membrane 24.86 24.93
Os04t0422300-01 Rice plasma membrane 25.98 24.87
Bra020740.1-P Field mustard extracellular 13.97 24.75
CDY70635 Canola plasma membrane 17.04 24.21
Solyc12g099580.1.1 Tomato plasma membrane 23.74 23.61
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 24.02 23.37
Os10t0199500-01 Rice golgi, plasma membrane, vacuole 14.8 23.14
PGSC0003DMT400011804 Potato plasma membrane 23.18 23.06
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 17.6 22.99
CDX97244 Canola endoplasmic reticulum, plasma membrane 17.6 22.99
KRH04198 Soybean extracellular, plasma membrane, vacuole 15.92 22.71
Bra037413.1-P Field mustard plasma membrane 22.91 22.59
CDY51711 Canola plasma membrane 22.91 22.59
CDY07144 Canola plasma membrane 22.91 22.53
AT4G01440.1 Thale cress plasma membrane 22.63 22.19
CDY69734 Canola plasma membrane 18.44 22.0
CDY70787 Canola golgi, plasma membrane 15.64 21.96
KRH42891 Soybean plasma membrane 24.02 21.83
KRH11051 Soybean plasma membrane 22.63 21.66
CDX97247 Canola plasma membrane 21.79 21.61
KRG90631 Soybean plasma membrane 20.39 21.1
Solyc04g007590.1.1 Tomato nucleus 20.39 21.04
CDX83041 Canola plasma membrane 18.72 20.81
CDY35779 Canola plasma membrane 20.95 20.66
CDY66443 Canola plasma membrane 20.95 20.66
PGSC0003DMT400015286 Potato plasma membrane 21.23 20.65
AT3G30340.1 Thale cress plasma membrane 20.95 20.6
Bra000926.1-P Field mustard plasma membrane 18.72 20.49
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 19.83 20.46
CDX68485 Canola plasma membrane 18.16 20.25
CDY45904 Canola plasma membrane 20.39 20.11
Bra000923.1-P Field mustard plasma membrane 19.83 19.78
CDX74385 Canola plasma membrane 19.83 19.61
Bra033290.1-P Field mustard plasma membrane 19.27 19.44
CDX97249 Canola plasma membrane 19.27 19.06
CDY01936 Canola plasma membrane 19.27 19.06
CDX91849 Canola plasma membrane 19.27 19.06
VIT_01s0010g03450.t01 Wine grape plasma membrane 19.27 19.06
Solyc01g066850.2.1 Tomato plasma membrane 20.95 19.04
CDY15204 Canola plasma membrane 19.27 19.01
CDX90005 Canola plasma membrane 19.27 19.01
Bra008546.1-P Field mustard cytosol, extracellular, plastid 12.29 18.97
CDX74381 Canola plasma membrane 19.27 18.96
KRH40897 Soybean plasma membrane 20.11 18.8
VIT_01s0010g03480.t01 Wine grape plasma membrane 18.99 18.78
Bra036199.1-P Field mustard plasma membrane 20.95 18.7
AT4G01450.2 Thale cress plasma membrane 18.72 18.56
KRG89109 Soybean plasma membrane 19.83 18.54
Zm00001d045567_P001 Maize plasma membrane 38.83 18.1
AT4G01430.1 Thale cress plasma membrane 18.44 18.08
Bra008548.1-P Field mustard extracellular, plasma membrane 17.6 18.05
Bra032618.1-P Field mustard plasma membrane 18.16 17.66
CDY32446 Canola plasma membrane 18.16 17.66
CDY37472 Canola cytosol, golgi, plasma membrane 18.16 17.66
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 17.32 17.61
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 16.48 17.51
Bra032617.1-P Field mustard plasma membrane 17.6 17.45
CDY55329 Canola plasma membrane 17.6 17.45
CDX91847 Canola plasma membrane 17.32 17.37
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 17.6 17.26
Bra000925.1-P Field mustard plasma membrane 16.48 17.2
Os01t0297700-01 Rice plasma membrane 17.88 16.93
CDX91850 Canola plasma membrane 13.97 16.84
Os04t0687800-01 Rice plasma membrane 18.44 16.02
Os10t0198900-00 Rice plasma membrane 15.08 15.08
CDY32447 Canola plasma membrane 12.01 14.33
Os08t0402800-01 Rice golgi, plasma membrane, vacuole 13.41 13.83
Os05t0357500-00 Rice cytosol 14.8 13.66
Os12t0288000-02 Rice golgi, plasma membrane 14.25 13.01
Os10t0163130-01 Rice plasma membrane 13.13 12.77
Os10t0197700-00 Rice plasma membrane 14.53 12.47
CDX86350 Canola plasma membrane 20.95 12.36
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 22.91 11.13
CDX97245 Canola plastid 0.28 0.89
CDY60103 Canola plasma membrane 0.0 0.0
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5EntrezGene:4339878ProteinID:BAD67689.1ProteinID:BAD67892.1ProteinID:BAF18488.1ProteinID:BAS95775.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
EnsemblPlantsGene:Os06g0109200EnsemblPlants:Os06t0109200-01PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF24UniProt:Q5VRN3
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0000457C47InterPro:WAT1-relatedRefSeq:XP_015642154.1SEG:seg
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os06t0109200-01)
Coordinates
chr6:+:543057..545777
Molecular Weight (calculated)
39618.3 Da
IEP (calculated)
9.658
GRAVY (calculated)
0.530
Length
358 amino acids
Sequence
(BLAST)
001: MWKMSQVDEW KPVIAMLFFD LISAVTTALL KKALAEGLDR LVLITLRQLV ATIFLAPIAY FKERGKRPKL TLEILVYLFF SAALGAALSQ YTFFYGLQYT
101: TATFAITFTN MSPVITFLIA ALLRVESLNM KNKAGAAKII GTLMSFAGVM LLTLYKGVAL THQVVSSVSS DHHHAEIEEP SKKSWTLGTV ALLANCLCFS
201: FWLLLQTKLT KKYPALYSST AYMFLISSLQ GGALTAAIQR RASVWVLTRT VEIVAVLYTG IMGSGVGYVL MTWCVEKRGP VFTSAFIPII QIMVAIIDFF
301: YLHENLYLGS VVGSILMILG LYILLWGKNR DTSAAASAKE AKEEEEDKEK QVKPLGPN
Best Arabidopsis Sequence Match ( AT3G30340.1 )
(BLAST)
001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSGIV GSGLCYVGMS WCLRQRGAVF TSSFIPLIQV FAAIFSFSFL
301: HEQIYCGSVI GSMVIIVGLY ILLWGKSKDK SASVTKQEPL DLDIEGCGTA PKELNSTAHQ VSAK
Arabidopsis Description
WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.