Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- golgi 4
- plasma membrane 7
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037413.1-P | Field mustard | plasma membrane | 87.95 | 88.43 |
| CDY51711 | Canola | plasma membrane | 87.95 | 88.43 |
| CDY07144 | Canola | plasma membrane | 87.67 | 87.91 |
| Bra008546.1-P | Field mustard | cytosol, extracellular, plastid | 51.51 | 81.03 |
| CDX97247 | Canola | plasma membrane | 74.52 | 75.35 |
| AT4G01450.2 | Thale cress | plasma membrane | 60.55 | 61.22 |
| AT1G01070.1 | Thale cress | golgi, plasma membrane, vacuole | 49.86 | 49.86 |
| AT1G11460.1 | Thale cress | golgi, plasma membrane, vacuole | 44.93 | 48.66 |
| AT4G01430.1 | Thale cress | plasma membrane | 48.22 | 48.22 |
| AT1G11450.3 | Thale cress | golgi, plasma membrane, vacuole | 46.3 | 48.01 |
| VIT_01s0010g03480.t01 | Wine grape | plasma membrane | 47.12 | 47.51 |
| VIT_01s0010g03450.t01 | Wine grape | plasma membrane | 46.85 | 47.24 |
| KRH36123 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 44.66 | 46.97 |
| KRG90631 | Soybean | plasma membrane | 44.38 | 46.82 |
| Solyc04g007590.1.1 | Tomato | nucleus | 44.38 | 46.69 |
| KRH04198 | Soybean | extracellular, plasma membrane, vacuole | 31.51 | 45.82 |
| KRH40897 | Soybean | plasma membrane | 46.85 | 44.65 |
| GSMUA_Achr7P04640_001 | Banana | extracellular, golgi, vacuole | 39.45 | 44.44 |
| AT3G30340.1 | Thale cress | plasma membrane | 43.56 | 43.68 |
| KRG89109 | Soybean | plasma membrane | 45.48 | 43.34 |
| PGSC0003DMT400015286 | Potato | plasma membrane | 41.92 | 41.58 |
| TraesCS6B01G015400.1 | Wheat | plasma membrane | 39.18 | 41.21 |
| GSMUA_Achr1P06340_001 | Banana | extracellular, golgi | 39.73 | 41.08 |
| Zm00001d054085_P001 | Maize | plasma membrane | 38.9 | 41.04 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 39.18 | 40.74 |
| TraesCS7D01G022700.1 | Wheat | golgi, plasma membrane, vacuole | 38.63 | 40.29 |
| TraesCS6D01G009800.1 | Wheat | plasma membrane | 38.63 | 40.06 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 38.36 | 40.0 |
| OQU75691 | Sorghum | plasma membrane | 38.63 | 39.83 |
| HORVU7Hr1G002600.1 | Barley | golgi, plasma membrane, vacuole | 38.36 | 39.77 |
| OQU84142 | Sorghum | plasma membrane | 40.0 | 38.93 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 38.36 | 38.57 |
| TraesCS1B01G041700.1 | Wheat | plasma membrane | 32.88 | 37.62 |
| TraesCS6D01G009900.2 | Wheat | plasma membrane | 35.89 | 37.43 |
| Zm00001d054081_P001 | Maize | plasma membrane | 35.89 | 37.43 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 33.7 | 37.27 |
| EER87714 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 36.44 | 37.25 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 35.62 | 37.14 |
| Os02t0103500-00 | Rice | endoplasmic reticulum, plasma membrane | 38.36 | 37.14 |
| TraesCS5D01G021800.1 | Wheat | plasma membrane | 33.7 | 37.05 |
| HORVU6Hr1G000500.17 | Barley | plasma membrane | 36.44 | 36.94 |
| Os04t0422300-01 | Rice | plasma membrane | 37.81 | 36.9 |
| Os06t0109300-01 | Rice | golgi, plasma membrane | 35.62 | 36.11 |
| EES04319 | Sorghum | extracellular, golgi, plasma membrane | 35.89 | 36.09 |
| TraesCS5D01G032500.1 | Wheat | extracellular, golgi, plasma membrane | 26.85 | 36.03 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular | 17.53 | 35.96 |
| Os06t0107600-01 | Rice | plasma membrane | 35.34 | 35.54 |
| EER87705 | Sorghum | plasma membrane | 35.62 | 35.42 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular | 17.26 | 35.39 |
| HORVU6Hr1G000600.1 | Barley | plasma membrane | 34.52 | 35.39 |
| TraesCS5B01G014100.1 | Wheat | plasma membrane | 33.7 | 35.34 |
| TraesCS6D01G012400.1 | Wheat | plasma membrane | 33.97 | 35.03 |
| TraesCS6B01G014700.1 | Wheat | plasma membrane | 33.97 | 35.03 |
| TraesCS4B01G086600.1 | Wheat | plasma membrane | 33.97 | 34.93 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 33.7 | 34.75 |
| TraesCS6B01G015700.1 | Wheat | plasma membrane | 33.7 | 34.65 |
| TraesCS4D01G164600.1 | Wheat | plasma membrane | 25.75 | 34.31 |
| TraesCS6D01G044200.1 | Wheat | plasma membrane | 30.96 | 34.24 |
| HORVU7Hr1G002200.2 | Barley | plasma membrane | 34.52 | 34.24 |
| HORVU7Hr1G019700.4 | Barley | plasma membrane | 33.42 | 34.17 |
| TraesCS7D01G082900.1 | Wheat | plasma membrane | 33.42 | 34.17 |
| TraesCS7D01G016700.1 | Wheat | golgi, plasma membrane, vacuole | 33.97 | 33.42 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 33.7 | 33.15 |
| TraesCS7D01G022800.1 | Wheat | plasma membrane | 33.15 | 33.06 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 33.15 | 32.97 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 33.15 | 32.61 |
| Zm00001d045576_P001 | Maize | plasma membrane | 35.34 | 32.49 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 33.42 | 32.36 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 21.1 | 31.82 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 33.97 | 30.77 |
| HORVU5Hr1G002560.1 | Barley | endoplasmic reticulum | 21.92 | 30.65 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 33.42 | 30.2 |
| AT1G09380.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 30.41 | 29.68 |
| AT1G68170.2 | Thale cress | plasma membrane | 27.12 | 27.05 |
| AT1G25270.1 | Thale cress | plasma membrane | 26.03 | 26.76 |
| GSMUA_Achr7P17540_001 | Banana | plasma membrane | 37.26 | 23.82 |
| HORVU5Hr1G067230.40 | Barley | mitochondrion | 32.88 | 23.76 |
| HORVU5Hr1G002470.1 | Barley | golgi | 15.89 | 23.29 |
| Os06t0109200-01 | Rice | plasma membrane | 22.19 | 22.63 |
| Zm00001d045567_P001 | Maize | plasma membrane | 38.9 | 18.49 |
| Os02t0103700-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:826697 | ProteinID:AAC19291.1 | ProteinID:AEE82026.1 | ArrayExpress:AT4G01440 | EnsemblPlantsGene:AT4G01440 |
| RefSeq:AT4G01440 | TAIR:AT4G01440 | RefSeq:AT4G01440-TAIR-G | EnsemblPlants:AT4G01440.1 | TAIR:AT4G01440.1 | EMBL:AY088033 |
| Unigene:At.34428 | ProteinID:CAB77714.1 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | RefSeq:NP_192053.1 | PFAM:PF00892 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF10 | UniProt:Q9M130 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI00000A04ED | InterPro:WAT1-related | SEG:seg | : |
Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
Coordinates
chr4:+:596397..598752
Molecular Weight (calculated)
40445.8 Da
IEP (calculated)
8.981
GRAVY (calculated)
0.595
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.