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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008546.1-P Field mustard cytosol, extracellular, plastid 64.27 100.0
CDY01937 Canola extracellular, plasma membrane, vacuole 33.24 96.0
CDY07144 Canola plasma membrane 80.33 79.67
CDY51711 Canola plasma membrane 79.5 79.06
AT4G01440.1 Thale cress plasma membrane 75.35 74.52
CDX91849 Canola plasma membrane 52.91 52.76
CDX74381 Canola plasma membrane 53.19 52.75
CDY69734 Canola plasma membrane 43.77 52.67
CDX97249 Canola plasma membrane 52.35 52.21
CDX74385 Canola plasma membrane 52.08 51.93
CDY01936 Canola plasma membrane 51.8 51.66
CDX83041 Canola plasma membrane 45.98 51.55
CDY00079 Canola extracellular 11.91 51.19
CDX91850 Canola plasma membrane 41.83 50.84
CDX68485 Canola plasma membrane 44.88 50.47
CDY70635 Canola plasma membrane 34.63 49.6
CDX91847 Canola plasma membrane 48.48 49.02
CDY70787 Canola golgi, plasma membrane 33.8 47.84
CDX97244 Canola endoplasmic reticulum, plasma membrane 34.63 45.62
CDY60103 Canola plasma membrane 13.57 45.37
KRG90631 Soybean plasma membrane 41.0 42.77
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.0 42.65
KRH04198 Soybean extracellular, plasma membrane, vacuole 29.64 42.63
VIT_01s0010g03480.t01 Wine grape plasma membrane 42.38 42.27
Solyc04g007590.1.1 Tomato nucleus 40.44 42.07
VIT_01s0010g03450.t01 Wine grape plasma membrane 41.83 41.71
CDY15204 Canola plasma membrane 41.83 41.6
CDY55329 Canola plasma membrane 41.27 41.27
CDX90005 Canola plasma membrane 41.27 41.05
CDY66443 Canola plasma membrane 41.27 41.05
CDY32446 Canola plasma membrane 41.83 41.03
CDY37472 Canola cytosol, golgi, plasma membrane 41.83 41.03
CDY35779 Canola plasma membrane 41.0 40.77
CDY45904 Canola plasma membrane 41.0 40.77
CDY32447 Canola plasma membrane 33.8 40.67
KRH40897 Soybean plasma membrane 42.38 39.95
KRG89109 Soybean plasma membrane 41.27 38.9
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 34.07 37.96
GSMUA_Achr1P06340_001 Banana extracellular, golgi 36.57 37.39
TraesCS6B01G015400.1 Wheat plasma membrane 35.18 36.6
Zm00001d054085_P001 Maize plasma membrane 34.9 36.42
PGSC0003DMT400015286 Potato plasma membrane 37.12 36.41
TraesCS6A01G008800.2 Wheat plasma membrane 35.18 36.18
TraesCS6D01G009800.1 Wheat plasma membrane 34.63 35.51
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 33.8 34.86
OQU75691 Sorghum plasma membrane 34.07 34.75
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 33.8 34.66
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 33.52 34.57
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 33.8 33.61
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 25.21 33.46
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 32.96 33.33
OQU84142 Sorghum plasma membrane 34.35 33.07
TraesCS1B01G041700.1 Wheat plasma membrane 29.09 32.92
Zm00001d054081_P001 Maize plasma membrane 31.86 32.86
TraesCS4D01G164600.1 Wheat plasma membrane 24.93 32.85
Os06t0109300-01 Rice golgi, plasma membrane 32.69 32.78
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 33.52 32.1
Os04t0422300-01 Rice plasma membrane 33.24 32.09
EES04319 Sorghum extracellular, golgi, plasma membrane 32.13 31.96
EER87705 Sorghum plasma membrane 32.41 31.88
TraesCS6D01G009900.2 Wheat plasma membrane 30.75 31.71
TraesCS6A01G008700.1 Wheat plasma membrane 30.47 31.43
TraesCS5D01G021800.1 Wheat plasma membrane 28.81 31.33
TraesCS5A01G015800.1 Wheat plasma membrane 28.53 31.21
HORVU6Hr1G000500.17 Barley plasma membrane 31.02 31.11
TraesCS4B01G086600.1 Wheat plasma membrane 30.47 30.99
TraesCS7D01G022800.1 Wheat plasma membrane 31.02 30.6
TraesCS7A01G024900.1 Wheat plasma membrane 31.02 30.52
Os06t0107600-01 Rice plasma membrane 30.19 30.03
HORVU7Hr1G019700.4 Barley plasma membrane 29.64 29.97
TraesCS7D01G082900.1 Wheat plasma membrane 29.64 29.97
TraesCS6B01G014700.1 Wheat plasma membrane 29.36 29.94
TraesCS4A01G464100.1 Wheat plasma membrane 30.75 29.92
HORVU6Hr1G000600.1 Barley plasma membrane 29.36 29.78
TraesCS6A01G009400.1 Wheat plasma membrane 29.09 29.66
TraesCS6D01G012400.1 Wheat plasma membrane 29.09 29.66
HORVU7Hr1G002200.2 Barley plasma membrane 30.19 29.62
TraesCS6B01G015700.1 Wheat plasma membrane 29.09 29.58
Zm00001d045576_P001 Maize plasma membrane 32.41 29.47
TraesCS6D01G044200.1 Wheat plasma membrane 26.87 29.39
TraesCS5B01G014100.1 Wheat plasma membrane 28.25 29.31
TraesCS7A01G020400.1 Wheat plasma membrane 29.64 28.84
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 29.64 28.84
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 14.13 28.65
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 14.13 28.65
TraesCS4A01G472400.1 Wheat plasma membrane 28.81 27.59
TraesCS7A01G087800.1 Wheat plasma membrane 30.47 27.3
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 19.39 26.82
TraesCS4A01G386700.1 Wheat plasma membrane 29.92 26.73
CDY64772 Canola plasma membrane 21.61 25.74
TraesCS6A01G038300.1 Wheat plasma membrane 17.17 25.62
CDX94976 Canola plasma membrane 26.32 24.68
CDY69907 Canola plasma membrane 26.32 24.68
CDY06357 Canola plasma membrane 20.22 24.66
CDX86350 Canola plasma membrane 41.27 24.55
CDX94974 Canola plasma membrane 26.04 24.42
CDY42121 Canola plasma membrane 22.71 23.84
CDX97245 Canola plastid 7.2 23.21
CDY12698 Canola plasma membrane 24.1 22.89
CDX81497 Canola plasma membrane 23.82 22.57
CDY59354 Canola plasma membrane 23.82 22.51
CDY24356 Canola plasma membrane 22.44 22.31
CDY64689 Canola plasma membrane 21.33 22.25
GSMUA_Achr7P17540_001 Banana plasma membrane 35.18 22.24
HORVU5Hr1G067230.40 Barley mitochondrion 30.75 21.98
Os06t0109200-01 Rice plasma membrane 21.61 21.79
CDY62464 Canola plasma membrane 21.61 21.14
CDY64463 Canola plasma membrane 7.2 20.47
CDY62465 Canola extracellular, plasma membrane, vacuole 13.57 20.08
Zm00001d045567_P001 Maize plasma membrane 35.18 16.54
HORVU5Hr1G002470.1 Barley golgi 11.36 16.47
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:CDX97247EnsemblPlantsGene:GSBRNA2T00104259001GO:A0A078E872GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF10PFAM:PF00892ProteinID:CDX97247ProteinID:CDX97247.1
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEC489MapMan:24.2.1.5::
Description
BnaA02g20380D
Coordinates
chrLK031898:+:86165..89071
Molecular Weight (calculated)
40004.2 Da
IEP (calculated)
9.794
GRAVY (calculated)
0.481
Length
361 amino acids
Sequence
(BLAST)
001: MSYCDGKWTP VTIMITINSA LGLGNAMVKK VLDGGFNHMV IATYRLAIST VCLAPIAFFW ERKTRPKLTL NILVQLFFSA LIGASLTQYF FLMGLSYTSA
101: TLACAFISMS PAVTFVMSLI FRVEKLNIKS KAGVGMVMGT LICIGGAFIL TTYKGVPLTK LHKLDLLTNN KPALKPEKWI TGCVLLFAGS SCFGSWMVIQ
201: SKVNDKYPCQ YSSTVILSFF GTIQCALLSL IKSRDIKGWI LTDKLDIMTI IYAGLVGSCS TTRKRSFCVN PINISINLLF KEISFNFSYI LRMDLNVKVL
301: YMCSVIGSGI VIFGLYIFLL GKVKQMKGDG AKKLPSHFGE EEREDDEQYK KGHLMVVPMT P
Best Arabidopsis Sequence Match ( AT4G01440.1 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.