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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000926.1-P Field mustard plasma membrane 95.62 86.85
CDY60103 Canola plasma membrane 30.98 85.19
CDX74385 Canola plasma membrane 80.47 66.02
CDX91849 Canola plasma membrane 80.13 65.75
CDX74381 Canola plasma membrane 80.13 65.38
CDX97249 Canola plasma membrane 78.11 64.09
CDX83041 Canola plasma membrane 69.02 63.66
CDX91847 Canola plasma membrane 76.43 63.59
CDX68485 Canola plasma membrane 68.69 63.55
CDY01936 Canola plasma membrane 77.44 63.54
CDY69734 Canola plasma membrane 60.94 60.33
CDY07144 Canola plasma membrane 59.26 48.35
CDY51711 Canola plasma membrane 58.59 47.93
CDX97245 Canola plastid 17.85 47.32
CDY01937 Canola extracellular, plasma membrane, vacuole 18.52 44.0
CDX97247 Canola plasma membrane 50.84 41.83
CDY32447 Canola plasma membrane 40.74 40.33
CDY32446 Canola plasma membrane 47.81 38.59
CDY37472 Canola cytosol, golgi, plasma membrane 47.81 38.59
CDX90005 Canola plasma membrane 47.14 38.57
CDY15204 Canola plasma membrane 47.14 38.57
CDY55329 Canola plasma membrane 46.8 38.5
Solyc04g007590.1.1 Tomato nucleus 44.78 38.33
KRH40897 Soybean plasma membrane 46.13 35.77
CDY64463 Canola plasma membrane 15.15 35.43
VIT_01s0010g03480.t01 Wine grape plasma membrane 43.1 35.36
KRG89109 Soybean plasma membrane 45.45 35.25
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.08 35.16
CDY45904 Canola plasma membrane 42.76 34.99
CDY66443 Canola plasma membrane 42.76 34.99
KRG90631 Soybean plasma membrane 40.74 34.97
CDY70635 Canola plasma membrane 29.63 34.92
VIT_01s0010g03450.t01 Wine grape plasma membrane 42.42 34.81
CDY35779 Canola plasma membrane 42.42 34.71
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 36.7 33.64
CDY70787 Canola golgi, plasma membrane 27.95 32.55
CDX97244 Canola endoplasmic reticulum, plasma membrane 29.97 32.48
PGSC0003DMT400015286 Potato plasma membrane 40.07 32.34
KRH04198 Soybean extracellular, plasma membrane, vacuole 26.94 31.87
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 18.86 31.46
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 18.52 30.9
TraesCS6B01G015400.1 Wheat plasma membrane 34.68 29.68
OQU75691 Sorghum plasma membrane 35.35 29.66
TraesCS6A01G008800.2 Wheat plasma membrane 34.68 29.34
TraesCS6D01G009800.1 Wheat plasma membrane 34.68 29.26
GSMUA_Achr1P06340_001 Banana extracellular, golgi 34.68 29.18
TraesCS1B01G041700.1 Wheat plasma membrane 31.31 29.15
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 34.34 29.14
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 34.34 29.14
TraesCS4B01G086600.1 Wheat plasma membrane 34.68 29.01
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 34.34 28.98
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 34.68 28.85
TraesCS5A01G015800.1 Wheat plasma membrane 31.99 28.79
Zm00001d054085_P001 Maize plasma membrane 33.0 28.32
TraesCS5D01G021800.1 Wheat plasma membrane 31.65 28.31
TraesCS6A01G008700.1 Wheat plasma membrane 33.33 28.29
TraesCS6D01G009900.2 Wheat plasma membrane 33.33 28.29
TraesCS6D01G044200.1 Wheat plasma membrane 31.31 28.18
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 34.34 28.1
HORVU6Hr1G000500.17 Barley plasma membrane 34.01 28.06
TraesCS7D01G082900.1 Wheat plasma membrane 33.67 28.01
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 35.35 27.85
Os06t0107600-01 Rice plasma membrane 34.01 27.82
HORVU7Hr1G019700.4 Barley plasma membrane 33.33 27.73
TraesCS5B01G014100.1 Wheat plasma membrane 32.32 27.59
Os06t0109300-01 Rice golgi, plasma membrane 33.33 27.5
HORVU6Hr1G000600.1 Barley plasma membrane 32.66 27.25
HORVU7Hr1G002200.2 Barley plasma membrane 33.67 27.17
OQU84142 Sorghum plasma membrane 34.01 26.93
Zm00001d054081_P001 Maize plasma membrane 31.65 26.86
TraesCS7A01G020400.1 Wheat plasma membrane 33.33 26.68
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 33.33 26.68
TraesCS6A01G009400.1 Wheat plasma membrane 31.65 26.55
TraesCS6B01G014700.1 Wheat plasma membrane 31.65 26.55
TraesCS6D01G012400.1 Wheat plasma membrane 31.65 26.55
Os04t0422300-01 Rice plasma membrane 33.0 26.2
CDY00079 Canola extracellular 7.41 26.19
EER87705 Sorghum plasma membrane 32.32 26.16
TraesCS4A01G472400.1 Wheat plasma membrane 33.0 25.99
TraesCS6B01G015700.1 Wheat plasma membrane 30.98 25.92
EES04319 Sorghum extracellular, golgi, plasma membrane 31.65 25.9
TraesCS7A01G024900.1 Wheat plasma membrane 31.31 25.34
TraesCS7D01G022800.1 Wheat plasma membrane 30.98 25.14
CDY06357 Canola plasma membrane 24.92 25.0
Zm00001d045576_P001 Maize plasma membrane 33.33 24.94
TraesCS7A01G087800.1 Wheat plasma membrane 33.67 24.81
TraesCS4A01G464100.1 Wheat plasma membrane 30.98 24.8
TraesCS4A01G386700.1 Wheat plasma membrane 33.67 24.75
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 21.21 24.14
CDY64772 Canola plasma membrane 24.58 24.09
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 21.55 23.53
CDY24356 Canola plasma membrane 28.28 23.14
CDY64689 Canola plasma membrane 25.59 21.97
CDY42121 Canola plasma membrane 25.25 21.8
TraesCS4D01G164600.1 Wheat plasma membrane 19.87 21.53
TraesCS6A01G038300.1 Wheat plasma membrane 17.51 21.49
CDY12698 Canola plasma membrane 27.27 21.32
CDX94976 Canola plasma membrane 27.27 21.04
CDY69907 Canola plasma membrane 27.27 21.04
CDX81497 Canola plasma membrane 26.94 21.0
CDY59354 Canola plasma membrane 26.94 20.94
CDX86350 Canola plasma membrane 42.76 20.92
CDX94974 Canola plasma membrane 26.94 20.78
CDY62464 Canola plasma membrane 25.59 20.6
CDY62465 Canola extracellular, plasma membrane, vacuole 16.5 20.08
GSMUA_Achr7P17540_001 Banana plasma membrane 36.36 18.91
HORVU5Hr1G002470.1 Barley golgi 15.82 18.88
HORVU5Hr1G067230.40 Barley mitochondrion 30.98 18.22
Os06t0109200-01 Rice plasma membrane 16.84 13.97
Zm00001d045567_P001 Maize plasma membrane 34.68 13.41
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:CDX91850EnsemblPlantsGene:GSBRNA2T00153465001GO:A0A078DRA3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF10PFAM:PF00892ProteinID:CDX91850ProteinID:CDX91850.1
SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE9629MapMan:24.2.1.5:
Description
BnaC03g31520D
Coordinates
chrLK031870:-:392282..394126
Molecular Weight (calculated)
32973.8 Da
IEP (calculated)
9.491
GRAVY (calculated)
0.760
Length
297 amino acids
Sequence
(BLAST)
001: MGYIDGKWAP LIMMTVIHMI NGMVNALIKK VLDGGIKNSA KFLKFIFIFK LFISALFGAS LVLYFYLLGL TYTSATLGSA FTAIMPALTF IMALIFRFEK
101: LNMKTKVGYC IVLGTMISLG GALVLTISWM LIQAKVNVNY PCPYSSTVIL SAFGTLQCAL LSLIKTRNVE EWILKDRLTI ITIIIAGVVA QGMCTVGISW
201: CIKQRGPVFT SAFTPVMLMS ATLFDFLIFH RMIYLGSIIG SVVVVIGLYV FLWSKSKQID DCEINKLPTN TVEERKEEED HTNVNKLGNL LVIPMTP
Best Arabidopsis Sequence Match ( AT4G01440.1 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAGAVAQ GICTVGTSWC IRKRGPIFTS IFTPVGLIFA TLFDFLILHR
301: QIFLGSVVGS GVVIFGLYIF LLGKVRLMKE ECEKKLPCRF NEDDQEEDDD EQYKKGHLMV VPMTP
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.