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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G044200.1 Wheat plasma membrane 59.0 46.67
TraesCS1B01G041700.1 Wheat plasma membrane 56.7 46.4
HORVU6Hr1G000600.1 Barley plasma membrane 54.02 39.61
TraesCS6A01G038300.1 Wheat plasma membrane 32.18 34.71
Zm00001d054081_P001 Maize plasma membrane 46.36 34.57
Bra025414.1-P Field mustard extracellular, plasma membrane, vacuole 27.59 34.45
HORVU4Hr1G034530.1 Barley golgi, plasma membrane 23.75 34.07
EES04319 Sorghum extracellular, golgi, plasma membrane 45.98 33.06
Os04t0422300-01 Rice plasma membrane 45.21 31.55
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 37.55 30.25
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 38.31 28.41
PGSC0003DMT400029440 Potato plasma membrane 24.52 26.89
HORVU6Hr1G000500.17 Barley plasma membrane 36.78 26.67
GSMUA_Achr1P06340_001 Banana extracellular, golgi 36.02 26.63
Bra029909.1-P Field mustard plasma membrane 25.67 26.48
HORVU7Hr1G002200.2 Barley plasma membrane 35.63 25.27
HORVU7Hr1G019700.4 Barley plasma membrane 34.1 24.93
CDY70635 Canola plasma membrane 23.75 24.6
KRH58997 Soybean plasma membrane 33.33 24.37
CDY69734 Canola plasma membrane 27.97 24.33
VIT_02s0025g03180.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 34.1 24.18
CDY70787 Canola golgi, plasma membrane 23.37 23.92
CDX83041 Canola plasma membrane 29.5 23.91
Bra000926.1-P Field mustard plasma membrane 29.89 23.85
Bra020740.1-P Field mustard extracellular 18.39 23.76
Bra008545.1-P Field mustard endoplasmic reticulum, plasma membrane 24.9 23.72
CDX97244 Canola endoplasmic reticulum, plasma membrane 24.9 23.72
CDX68485 Canola plasma membrane 28.74 23.36
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 31.03 23.34
Solyc12g099580.1.1 Tomato plasma membrane 32.18 23.33
KRG90631 Soybean plasma membrane 30.65 23.12
KRH11051 Soybean plasma membrane 32.95 22.99
VIT_01s0010g03450.t01 Wine grape plasma membrane 31.8 22.93
CDY66443 Canola plasma membrane 31.8 22.86
CDY35779 Canola plasma membrane 31.8 22.86
PGSC0003DMT400011804 Potato plasma membrane 31.42 22.78
KRH04198 Soybean extracellular, plasma membrane, vacuole 21.84 22.71
VIT_01s0010g03480.t01 Wine grape plasma membrane 31.42 22.65
CDY45904 Canola plasma membrane 31.42 22.59
AT3G30340.1 Thale cress plasma membrane 31.42 22.53
CDY01936 Canola plasma membrane 31.03 22.38
CDX97249 Canola plasma membrane 30.65 22.1
AT4G01440.1 Thale cress plasma membrane 30.65 21.92
KRH42891 Soybean plasma membrane 32.95 21.83
CDY51711 Canola plasma membrane 30.27 21.76
Bra037413.1-P Field mustard plasma membrane 30.27 21.76
Bra000923.1-P Field mustard plasma membrane 29.89 21.73
CDY07144 Canola plasma membrane 30.27 21.7
CDX74385 Canola plasma membrane 29.89 21.55
CDX91849 Canola plasma membrane 29.89 21.55
CDX74381 Canola plasma membrane 29.89 21.43
Solyc04g007590.1.1 Tomato nucleus 28.35 21.33
CDX91850 Canola plasma membrane 24.14 21.21
AT4G01450.2 Thale cress plasma membrane 28.74 20.78
Bra032617.1-P Field mustard plasma membrane 28.74 20.78
Bra008548.1-P Field mustard extracellular, plasma membrane 27.59 20.63
CDY55329 Canola plasma membrane 28.35 20.5
KRG89109 Soybean plasma membrane 29.89 20.37
Solyc01g066850.2.1 Tomato plasma membrane 30.65 20.3
PGSC0003DMT400015286 Potato plasma membrane 28.35 20.11
KRH40897 Soybean plasma membrane 29.5 20.1
Bra033290.1-P Field mustard plasma membrane 27.2 20.0
AT4G01430.1 Thale cress plasma membrane 27.97 20.0
CDY15204 Canola plasma membrane 27.2 19.56
CDX90005 Canola plasma membrane 27.2 19.56
Bra000925.1-P Field mustard plasma membrane 25.67 19.53
HORVU3Hr1G040230.1 Barley plasma membrane 28.74 19.48
CDX97247 Canola plasma membrane 26.82 19.39
CDX91847 Canola plasma membrane 26.44 19.33
AT1G11450.3 Thale cress golgi, plasma membrane, vacuole 26.05 19.32
Bra032618.1-P Field mustard plasma membrane 27.2 19.29
CDY37472 Canola cytosol, golgi, plasma membrane 27.2 19.29
CDY32446 Canola plasma membrane 27.2 19.29
CDY32447 Canola plasma membrane 21.84 19.0
AT1G11460.1 Thale cress golgi, plasma membrane, vacuole 24.52 18.99
Bra036199.1-P Field mustard plasma membrane 29.12 18.95
AT1G01070.1 Thale cress golgi, plasma membrane, vacuole 26.44 18.9
HORVU5Hr1G067230.40 Barley mitochondrion 35.25 18.22
HORVU7Hr1G108550.2 Barley plasma membrane 26.44 18.11
HORVU2Hr1G074250.2 Barley plasma membrane 25.29 17.98
HORVU7Hr1G023010.2 Barley plasma membrane 23.37 17.68
HORVU7Hr1G023000.2 Barley golgi 19.16 17.36
HORVU4Hr1G070930.2 Barley plasma membrane 24.14 17.03
HORVU2Hr1G121210.3 Barley golgi, plasma membrane 22.99 16.57
HORVU2Hr1G124740.1 Barley plastid 28.74 16.56
GSMUA_Achr7P17540_001 Banana plasma membrane 34.48 15.76
Bra008546.1-P Field mustard cytosol, extracellular, plastid 13.03 14.66
HORVU3Hr1G107360.19 Barley plastid 24.9 14.22
CDX86350 Canola plasma membrane 31.8 13.67
HORVU3Hr1G080200.2 Barley plasma membrane 20.31 12.68
KRH21225 Soybean mitochondrion, nucleus, plasma membrane, plastid 32.18 11.4
HORVU5Hr1G002470.1 Barley golgi 9.58 10.04
CDY60103 Canola plasma membrane 3.45 8.33
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 5.36 7.87
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 5.36 7.87
CDX97245 Canola plastid 2.68 6.25
HORVU2Hr1G121200.2 Barley extracellular, plasma membrane 3.45 4.92
Protein Annotations
EnsemblPlants:HORVU5Hr1G002560.1EnsemblPlantsGene:HORVU5Hr1G002560GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:EamA_domInterPro:WAT1-related
PANTHER:PTHR31218PANTHER:PTHR31218:SF10PFAM:PF00892SEG:segSUPFAM:SSF103481TMHMM:TMhelix
MapMan:24.2.1.5:::::
Description
No Description!
Coordinates
chrchr5H:-:6704370..6705429
Molecular Weight (calculated)
25360.5 Da
IEP (calculated)
9.250
GRAVY (calculated)
0.462
Length
261 amino acids
Sequence
(BLAST)
001: MDWKPAVLMM AVVIMYAVLN ALTKMAFNEG MHTTVFIVLR LLVAALFLSP IAYFKERKSR PKQTMEIFIY LFFSALLGAS LIQWLFFLGL RYTTATFASA
101: FNNTTPMFTF LLALAFKVEK IDVASRSGAA KLAGTAVGLA GAMVLALYHG PTLMGPPSGD XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXDPLPLL
201: MYLPWQLIAP NQGLWCSVCA YYVCENIRPF TTELDTKSGT LVARKEYSQF LYSWSNIYTH I
Best Arabidopsis Sequence Match ( AT4G01440.4 )
(BLAST)
001: MGYCDGKWTP VIIMVMINSA LGLANALVKK VLDGGVNHMV IATYRLAIST LFLAPIAFFW ERKTRPTLTL NILVQLFFSA LVGASLTQYF FLLGLSYTSA
101: TLACAFISMT PAITFVMALI FRVEKLNMKS KAGMGMVMGA LICIGGALLL TMYKGVPLTK LRKLETHQLI NNNHAMKPEN WIIGCVLLFA GSSCFGSWML
201: IQAKVNEKYP CQYSSTVVLS FFGTIQCALL SLIKSRDITA WILTDKLDIV TIVYAVSVFS ITEKVGSICL IL
Arabidopsis Description
WAT1-related protein At4g01440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M130]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.