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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 92.73 92.73
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 91.95 91.95
TraesCS3A01G196000.1 Wheat plasma membrane 84.68 86.02
Os01t0297700-01 Rice plasma membrane 76.1 77.51
Zm00001d040593_P001 Maize plasma membrane 68.83 67.77
EES00623 Sorghum plasma membrane 68.57 66.0
Zm00001d009063_P001 Maize plasma membrane 67.79 65.74
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 56.1 57.45
GSMUA_AchrUn_... Banana plasma membrane 55.58 57.07
HORVU7Hr1G108550.2 Barley plasma membrane 53.25 53.81
CDY06357 Canola plasma membrane 36.62 47.64
Bra031664.1-P Field mustard plasma membrane 44.42 46.98
CDY64772 Canola plasma membrane 36.62 46.53
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.68 45.99
KRG90488 Soybean plasma membrane 44.68 45.87
PGSC0003DMT400007108 Potato plasma membrane 39.74 45.54
Bra020026.1-P Field mustard plasma membrane 45.45 45.45
CDX94976 Canola plasma membrane 45.45 45.45
CDY69907 Canola plasma membrane 45.45 45.45
Solyc01g100880.2.1 Tomato plasma membrane 42.08 45.25
CDX94974 Canola plasma membrane 45.19 45.19
KRH33776 Soybean endoplasmic reticulum 42.86 43.77
KRH68417 Soybean extracellular, golgi, plasma membrane 41.3 43.44
KRG96698 Soybean extracellular, golgi, plasma membrane 41.3 43.32
KRG96712 Soybean extracellular, golgi, plasma membrane 41.3 43.32
Solyc12g035400.1.1 Tomato plasma membrane 37.66 41.31
PGSC0003DMT400010825 Potato plasma membrane 37.4 40.79
Solyc01g100910.2.1 Tomato plasma membrane 38.44 40.44
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 36.36 38.04
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 37.14 37.93
Solyc01g100890.2.1 Tomato plasma membrane 36.88 37.77
Solyc12g096850.1.1 Tomato plasma membrane 34.29 37.5
PGSC0003DMT400075201 Potato mitochondrion 17.4 37.43
HORVU2Hr1G074250.2 Barley plasma membrane 34.55 36.24
HORVU6Hr1G000600.1 Barley plasma membrane 33.25 35.96
HORVU4Hr1G070930.2 Barley plasma membrane 34.29 35.68
HORVU6Hr1G000500.17 Barley plasma membrane 32.47 34.72
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 30.39 33.24
HORVU2Hr1G124740.1 Barley plastid 37.4 31.79
HORVU7Hr1G002200.2 Barley plasma membrane 30.13 31.52
HORVU7Hr1G019700.4 Barley plasma membrane 28.83 31.09
HORVU7Hr1G023010.2 Barley plasma membrane 26.75 29.86
HORVU4Hr1G034530.1 Barley golgi, plasma membrane 13.77 29.12
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 19.48 28.74
HORVU3Hr1G080200.2 Barley plasma membrane 30.91 28.47
HORVU2Hr1G121210.3 Barley golgi, plasma membrane 25.45 27.07
HORVU7Hr1G023000.2 Barley golgi 19.48 26.04
HORVU5Hr1G002470.1 Barley golgi 16.1 24.9
HORVU5Hr1G067230.40 Barley mitochondrion 30.65 23.37
HORVU2Hr1G121200.2 Barley extracellular, plasma membrane 10.65 22.4
HORVU3Hr1G107360.19 Barley plastid 24.94 21.01
Protein Annotations
EnsemblPlants:HORVU3Hr1G040230.1EnsemblPlantsGene:HORVU3Hr1G040230GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:EamA_dom
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF11PFAM:PF00892SUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI000B488C2EUniProt:A0A287KUM3MapMan:24.2.1.5:::
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287KUM3]
Coordinates
chrchr3H:-:241474823..241478661
Molecular Weight (calculated)
41171.1 Da
IEP (calculated)
8.635
GRAVY (calculated)
0.615
Length
385 amino acids
Sequence
(BLAST)
001: MGKECLPTVA MVLVQLGFAG MNVLSKLALD TGMSPYVLIA YRNLIAGMFL APGAYYFERR SGMVITKQVL IQIFFSSIFG ATLNQVLYFV GLKSTTPTVA
101: CALSNTLPAL TFVMAAILKM ETVRLRTSSG KAKVLGTVVC VGGSMVMPFY KGPLLKVWVS PMHWRYAEHT IDATATPSGN AAIVGDVLII LSCVAWAVWF
201: ILQSKMSERF SAPYTSTTIM SLMAGVQCAG VSAVIDRSVS AWKLGFDIRL YAALYVGVVG SGIAFAVMSW CIQSRGPLFV SMFSPLMLVV VAVVGWAILE
301: EKIHLGSAIG SSLIVAGLYL VLWGKGREMS GQADLGDDGD GVAPETMIVL ELNCKDTRTG NAAVLPVFDT TSPKHQLETT PNGTN
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.