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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g035400.1.1 Tomato plasma membrane 93.2 93.73
PGSC0003DMT400007108 Potato plasma membrane 55.52 58.33
PGSC0003DMT400075201 Potato mitochondrion 24.93 49.16
Bra031664.1-P Field mustard plasma membrane 49.01 47.53
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 49.58 46.79
CDY64772 Canola plasma membrane 39.94 46.53
KRH68417 Soybean extracellular, golgi, plasma membrane 48.16 46.45
KRG96712 Soybean extracellular, golgi, plasma membrane 48.16 46.32
KRG96698 Soybean extracellular, golgi, plasma membrane 48.16 46.32
Bra020026.1-P Field mustard plasma membrane 50.42 46.23
CDX94976 Canola plasma membrane 50.42 46.23
CDY69907 Canola plasma membrane 50.14 45.97
CDY06357 Canola plasma membrane 38.53 45.95
CDX94974 Canola plasma membrane 49.29 45.19
KRG90488 Soybean plasma membrane 47.31 44.53
KRH33776 Soybean endoplasmic reticulum 47.03 44.03
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 45.33 42.55
GSMUA_AchrUn_... Banana plasma membrane 44.19 41.6
Os01t0297700-01 Rice plasma membrane 41.93 39.15
TraesCSU01G213700.1 Wheat plasma membrane 35.98 39.08
TraesCS7A01G526900.1 Wheat plasma membrane 33.43 38.31
HORVU3Hr1G040230.1 Barley plasma membrane 40.79 37.4
Zm00001d040593_P001 Maize plasma membrane 41.36 37.34
TraesCS7B01G379000.1 Wheat plasma membrane 40.23 37.17
Zm00001d009063_P001 Maize plasma membrane 41.64 37.03
TraesCS7B01G379300.1 Wheat plasma membrane 39.38 36.97
TraesCS3A01G196000.1 Wheat plasma membrane 39.66 36.94
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 40.23 36.88
HORVU7Hr1G108550.2 Barley plasma membrane 39.66 36.75
TraesCS7B01G379400.1 Wheat plasma membrane 39.09 36.7
TraesCS7A01G477400.1 Wheat plasma membrane 39.09 36.7
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 39.94 36.62
TraesCS7D01G464900.2 Wheat plasma membrane 38.81 36.34
EES00623 Sorghum plasma membrane 41.08 36.25
TraesCS7A01G477500.1 Wheat plasma membrane 38.24 35.16
TraesCS7D01G465000.1 Wheat plasma membrane 37.96 34.54
TraesCS7D01G472200.2 Wheat plasma membrane 34.84 34.17
PGSC0003DMT400077027 Potato plasma membrane 28.05 33.9
PGSC0003DMT400076507 Potato plasma membrane 37.39 33.85
TraesCS7B01G388500.1 Wheat plasma membrane 33.43 32.69
PGSC0003DMT400029440 Potato plasma membrane 21.81 32.35
PGSC0003DMT400011804 Potato plasma membrane 32.86 32.22
PGSC0003DMT400010115 Potato golgi, plasma membrane, vacuole 30.88 31.23
PGSC0003DMT400015286 Potato plasma membrane 28.9 27.72
PGSC0003DMT400001491 Potato golgi, plasma membrane, plastid 22.1 25.66
PGSC0003DMT400010175 Potato golgi 22.95 19.52
Protein Annotations
EntrezGene:102600872MapMan:24.2.1.5ncoils:CoilInterPro:EamA_domGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:M0ZYK9PFAM:PF00892EnsemblPlantsGene:PGSC0003DMG400004233PGSC:PGSC0003DMG400004233EnsemblPlants:PGSC0003DMT400010825
PANTHER:PTHR31218PANTHER:PTHR31218:SF11SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000294E28BInterPro:WAT1-related
RefSeq:XP_006341313.1:::::
Description
Nodulin protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004233]
Coordinates
chr12:-:38101094..38105242
Molecular Weight (calculated)
39202.7 Da
IEP (calculated)
8.517
GRAVY (calculated)
0.588
Length
353 amino acids
Sequence
(BLAST)
001: MKKKGSDLLP FIAMVIVQVG YAGSNVVTKL VMDTGMDPFV QTAYRPIFAT ISIAPFAYFL ERKTRPKLSL SVFFQIFLCS IIGITANQYT FCIGLKYTTP
101: TIVSALDNLI PAFTFVLAVP FGLEKLGLRS IAGQAKLIGT IVCVGGAMLL SLYRGPVVIG QLGFHWKYVE NTTDDKDVNS THTNFLLGPF ILIISSITYA
201: LWLIIQARVN EKYAAPYSST LLMFFMASFQ CMIISFCVVP KASEWALNPI RAISVVYNGT VCSSLALYLC SWCIERKGPL YVSMFNPLLL VIAAFLSWIL
301: LREKLYLGIV VGSILTVVGL YGFLWGQKKE MEQSKNEIEE EDVVEANKED IKA
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.