Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g005350.1.1 | Tomato | plasma membrane | 58.31 | 64.71 |
| PGSC0003DMT400077027 | Potato | plasma membrane | 22.17 | 31.51 |
| PGSC0003DMT400010115 | Potato | golgi, plasma membrane, vacuole | 21.69 | 25.79 |
| PGSC0003DMT400076507 | Potato | plasma membrane | 23.86 | 25.38 |
| PGSC0003DMT400007108 | Potato | plasma membrane | 19.76 | 24.4 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 17.83 | 24.34 |
| PGSC0003DMT400010825 | Potato | plasma membrane | 19.52 | 22.95 |
| PGSC0003DMT400011804 | Potato | plasma membrane | 19.28 | 22.22 |
| PGSC0003DMT400015286 | Potato | plasma membrane | 17.35 | 19.57 |
| PGSC0003DMT400029440 | Potato | plasma membrane | 10.6 | 18.49 |
| PGSC0003DMT400075201 | Potato | mitochondrion | 3.61 | 8.38 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400010175 | EnsemblPlantsGene:PGSC0003DMG400003986 | EntrezGene:102579545 | EntrezGene:102598630 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:EamA_dom | InterPro:PAP/fibrillin_dom | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF4 | PFAM:PF00892 |
| PFAM:PF04755 | PGSC:PGSC0003DMG400003986 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000295751F |
| UniProt:M0ZXL8 | MapMan:24.2.1.5 | : | : | : | : |
Description
Structural molecule [Source:PGSC_GENE;Acc:PGSC0003DMG400003986]
Coordinates
chr11:+:7709819..7717051
Molecular Weight (calculated)
46265.1 Da
IEP (calculated)
9.483
GRAVY (calculated)
0.255
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIRFENLSF DKVSGKAKVM GTMICVGGAM LLTIYKGIEV HMWPIKIDLL HHDNESTTHK KLVGGTFALG IVLAVTSCIC YSLWIVLLAK VSKNYPCHYS
101: STALMSLMGS IQSVLFALCF DRQVSQWRLG WDRRLFVVLY LGTLGSGIVV ILMTWCSQKR GPLFVSVFNP LILLFVALAS SLFLNETLYL GSILGGLLII
201: MGLYVVLWGK GKDMKASKAI ILSKGALQKN DLEAPNQDQG INRGIFGVSS DKKFEIEELV KQLESQNPTF EPTSSLDKVA GNWKLIYSTI SILGSKRTKL
301: GLRDFITLGD LYQNIDISQG KAVNVIKFNA RGLSLLSGEL RIEASFKIAS KSRVDIFYNN SGITPDQLMN VFQKNYNLLL GIFNPEGWLE ITYVDENLRI
401: GRDDKGNIFV LERVN
101: STALMSLMGS IQSVLFALCF DRQVSQWRLG WDRRLFVVLY LGTLGSGIVV ILMTWCSQKR GPLFVSVFNP LILLFVALAS SLFLNETLYL GSILGGLLII
201: MGLYVVLWGK GKDMKASKAI ILSKGALQKN DLEAPNQDQG INRGIFGVSS DKKFEIEELV KQLESQNPTF EPTSSLDKVA GNWKLIYSTI SILGSKRTKL
301: GLRDFITLGD LYQNIDISQG KAVNVIKFNA RGLSLLSGEL RIEASFKIAS KSRVDIFYNN SGITPDQLMN VFQKNYNLLL GIFNPEGWLE ITYVDENLRI
401: GRDDKGNIFV LERVN
001: MTSNLFQPPS MAASRGAISR RTGNVKVLVS FTSSNGKTLS FSDNSFRLRP MFIGKVTEQS SCSSPNEQQQ DEEQEQEQEE ITVSHIKEEL YEALKGINRG
101: IFGVKSDKKT EIEGLVKLLE CRNPTPEPTG ELDKIGGCWK LIYSTITVLG SKRTKLGLRD FVSLGDLLQQ IDIAQGKTVH VLKFDVRGLN LLDGEFRIVA
201: SFKISSKSSV EITYESSTIK PDQLMNIFRK NMDLLLGIFN PEGLFEISYL DEDLQVGRDG KGNVFVLERI EKP
101: IFGVKSDKKT EIEGLVKLLE CRNPTPEPTG ELDKIGGCWK LIYSTITVLG SKRTKLGLRD FVSLGDLLQQ IDIAQGKTVH VLKFDVRGLN LLDGEFRIVA
201: SFKISSKSSV EITYESSTIK PDQLMNIFRK NMDLLLGIFN PEGLFEISYL DEDLQVGRDG KGNVFVLERI EKP
Arabidopsis Description
PAP7Probable plastid-lipid-associated protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5M755]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.