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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g100910.2.1 Tomato plasma membrane 84.78 85.25
Solyc01g100920.2.1 Tomato golgi, plasma membrane, vacuole 83.15 81.17
Solyc12g035400.1.1 Tomato plasma membrane 68.21 71.51
Solyc12g096850.1.1 Tomato plasma membrane 56.79 59.38
Solyc01g100890.2.1 Tomato plasma membrane 58.42 57.18
Solyc01g100880.2.1 Tomato plasma membrane 54.08 55.59
CDY64772 Canola plasma membrane 39.4 47.85
KRG96698 Soybean extracellular, golgi, plasma membrane 47.28 47.41
KRG96712 Soybean extracellular, golgi, plasma membrane 47.28 47.41
KRH68417 Soybean extracellular, golgi, plasma membrane 47.01 47.27
CDY06357 Canola plasma membrane 37.77 46.96
Bra031664.1-P Field mustard plasma membrane 45.65 46.15
Bra020026.1-P Field mustard plasma membrane 47.28 45.19
CDX94976 Canola plasma membrane 47.28 45.19
KRH33776 Soybean endoplasmic reticulum 46.2 45.09
CDY69907 Canola plasma membrane 47.01 44.94
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 45.65 44.92
CDX94974 Canola plasma membrane 46.47 44.42
KRG90488 Soybean plasma membrane 45.11 44.27
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 42.66 41.76
GSMUA_AchrUn_... Banana plasma membrane 41.58 40.8
Os01t0297700-01 Rice plasma membrane 38.86 37.83
TraesCS7A01G526900.1 Wheat plasma membrane 30.98 37.01
TraesCS3A01G196000.1 Wheat plasma membrane 38.04 36.94
TraesCSU01G213700.1 Wheat plasma membrane 32.61 36.92
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 38.04 36.36
HORVU3Hr1G040230.1 Barley plasma membrane 38.04 36.36
Zm00001d040593_P001 Maize plasma membrane 38.32 36.06
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 37.5 35.84
TraesCS7A01G477400.1 Wheat plasma membrane 36.41 35.64
TraesCS7B01G379300.1 Wheat plasma membrane 36.41 35.64
TraesCS7B01G379400.1 Wheat plasma membrane 36.14 35.37
TraesCS7D01G464900.2 Wheat plasma membrane 35.87 35.01
Zm00001d009063_P001 Maize plasma membrane 37.5 34.76
TraesCS7D01G472200.2 Wheat plasma membrane 33.97 34.72
HORVU7Hr1G108550.2 Barley plasma membrane 35.87 34.65
EES00623 Sorghum plasma membrane 37.5 34.5
TraesCS7B01G379000.1 Wheat plasma membrane 35.6 34.29
TraesCS7A01G477500.1 Wheat plasma membrane 35.6 34.11
TraesCS7B01G388500.1 Wheat plasma membrane 32.61 33.24
TraesCS7D01G465000.1 Wheat plasma membrane 34.51 32.73
Solyc01g104750.2.1 Tomato plasma membrane 32.88 31.03
Solyc11g005350.1.1 Tomato plasma membrane 31.52 31.02
Solyc12g099580.1.1 Tomato plasma membrane 29.35 30.0
Solyc11g005410.1.1 Tomato plasma membrane 30.71 29.82
Solyc07g015910.2.1 Tomato plasma membrane 30.98 29.01
Solyc04g007590.1.1 Tomato nucleus 26.9 28.53
Solyc01g066850.2.1 Tomato plasma membrane 29.08 27.16
Solyc03g080070.2.1 Tomato plasma membrane 26.9 25.45
Protein Annotations
MapMan:24.2.1.5InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:K4B1C1PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF11SUPFAM:SSF103481
EnsemblPlantsGene:Solyc01g100900.2EnsemblPlants:Solyc01g100900.2.1TMHMM:TMhelixUniParc:UPI00027678B7InterPro:WAT1-relatedSEG:seg
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4B1C1]
Coordinates
chr1:+:90793629..90796850
Molecular Weight (calculated)
40939.9 Da
IEP (calculated)
9.349
GRAVY (calculated)
0.535
Length
368 amino acids
Sequence
(BLAST)
001: MGNELMIFMV MVIVQVAFAG MIIITKLVMD SGMDPFVQSA YKPIFATISI APFAYVLERK TRPKMTRSTF FQIFLCSIFG ITANQYAYFI GLNNSTPTIA
101: SAIDNLIPAF TFIIAVPLGV EKLGLRSIAG QTKFWGTIVC VGGAMLLSLY HGKVVIGQLG FHWKYEENTG KDVNSSHSNF FLGPFLLIMA SLTYAIWLII
201: QGRVSEKYAA PYTCITLMCF MASVESVIIG FCVVPKLSEW ALNPIRAISV VYNGVVSTSF AYFLSSWCIE KKGPLYVSMF NPLLLVISAF LSWTLLREKL
301: YLGVVVGSII VVAGLYGFLW GKKMETSVEN IEVNKEKMMK QFNKSVDLEL QLPKSNDQRS SELAKTKS
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.