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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g100900.2.1 Tomato golgi, plasma membrane, vacuole 81.17 83.15
Solyc01g100910.2.1 Tomato plasma membrane 79.05 81.42
Solyc12g035400.1.1 Tomato plasma membrane 65.78 70.66
Solyc12g096850.1.1 Tomato plasma membrane 55.17 59.09
Solyc01g100890.2.1 Tomato plasma membrane 57.29 57.45
Solyc01g100880.2.1 Tomato plasma membrane 54.11 56.98
KRG96712 Soybean extracellular, golgi, plasma membrane 46.68 47.96
KRG96698 Soybean extracellular, golgi, plasma membrane 46.68 47.96
CDY64772 Canola plasma membrane 38.46 47.85
KRH68417 Soybean extracellular, golgi, plasma membrane 46.15 47.54
Bra031664.1-P Field mustard plasma membrane 45.62 47.25
CDY06357 Canola plasma membrane 36.87 46.96
KRH33776 Soybean endoplasmic reticulum 46.42 46.42
KRG90488 Soybean plasma membrane 45.89 46.13
Bra020026.1-P Field mustard plasma membrane 46.95 45.97
CDX94976 Canola plasma membrane 46.68 45.71
CDY69907 Canola plasma membrane 46.42 45.45
AT1G09380.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.83 45.19
CDX94974 Canola plasma membrane 45.89 44.94
GSMUA_Achr9P16660_001 Banana golgi, plasma membrane, vacuole 41.64 41.76
GSMUA_AchrUn_... Banana plasma membrane 39.79 40.0
Os01t0297700-01 Rice plasma membrane 39.52 39.42
TraesCS7A01G526900.1 Wheat plasma membrane 30.77 37.66
TraesCSU01G213700.1 Wheat plasma membrane 32.1 37.23
HORVU3Hr1G040230.1 Barley plasma membrane 37.93 37.14
Zm00001d040593_P001 Maize plasma membrane 37.93 36.57
EES00623 Sorghum plasma membrane 38.73 36.5
TraesCS3B01G227600.1 Wheat extracellular, golgi, plasma membrane 37.14 36.36
TraesCS3D01G199100.1 Wheat extracellular, golgi, plasma membrane 37.14 36.36
TraesCS3A01G196000.1 Wheat plasma membrane 36.34 36.15
TraesCS7B01G379000.1 Wheat plasma membrane 36.6 36.13
Zm00001d009063_P001 Maize plasma membrane 37.93 36.02
TraesCS7B01G379300.1 Wheat plasma membrane 35.54 35.64
TraesCS7D01G472200.2 Wheat plasma membrane 33.95 35.56
HORVU7Hr1G108550.2 Barley plasma membrane 35.81 35.43
TraesCS7B01G379400.1 Wheat plasma membrane 35.28 35.37
TraesCS7A01G477400.1 Wheat plasma membrane 35.28 35.37
TraesCS7D01G464900.2 Wheat plasma membrane 35.28 35.28
TraesCS7A01G477500.1 Wheat plasma membrane 34.48 33.85
TraesCS7B01G388500.1 Wheat plasma membrane 32.36 33.8
Solyc01g104750.2.1 Tomato plasma membrane 33.95 32.82
Solyc11g005350.1.1 Tomato plasma membrane 32.1 32.35
TraesCS7D01G465000.1 Wheat plasma membrane 33.16 32.22
Solyc12g099580.1.1 Tomato plasma membrane 29.71 31.11
Solyc11g005410.1.1 Tomato plasma membrane 30.77 30.61
Solyc07g015910.2.1 Tomato plasma membrane 31.57 30.28
Solyc04g007590.1.1 Tomato nucleus 27.32 29.68
Solyc01g066850.2.1 Tomato plasma membrane 28.38 27.16
Solyc03g080070.2.1 Tomato plasma membrane 27.06 26.22
Protein Annotations
MapMan:24.2.1.5InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085UniProt:K4B1C3PFAM:PF00892PANTHER:PTHR31218PANTHER:PTHR31218:SF11SUPFAM:SSF103481
EnsemblPlantsGene:Solyc01g100920.2EnsemblPlants:Solyc01g100920.2.1TMHMM:TMhelixUniParc:UPI00027678B9InterPro:WAT1-relatedSEG:seg
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4B1C3]
Coordinates
chr1:+:90820400..90823534
Molecular Weight (calculated)
41988.4 Da
IEP (calculated)
9.375
GRAVY (calculated)
0.526
Length
377 amino acids
Sequence
(BLAST)
001: MGNELMVFMI MVIVQVAYAG MIIISKLVMD GGMNAFVQSA YRPIFATISI APFAFFLERK TRPKMTCSVL FQIFLCSIFG ITANQNIYFI GLKNSTPTIV
101: SAIDNLIPAF TFIIAVPLGI EKLGLRSIAG QTKFWGTIIC VGGAMLLSLY HGKVVIGQLG FHWKYAENTS KDVNSANSNF FLGPFLLIVS SLTYAIWLII
201: QARVNEKYAA PYTSTTLMCL MASVECVIIG FCVVPKLSEW KLNPIRAVSV VYNGAMATSF TYFLSSWCIE KKGPLYVSMF NPLFLVISAF LSWILLREKL
301: YLGVVLGSII VVAGMYGFLW GKKMETSAED IDVLELTKEK KQLSTKLQVD LELQLTQNPK DNNNNNMKQI TKSKTEL
Best Arabidopsis Sequence Match ( AT1G09380.1 )
(BLAST)
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.