Factsheet for HORVU4Hr1G034530.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G000500.17	Barley	plasma membrane	78.57	39.72
CDY01937	Canola	extracellular, plasma membrane, vacuole	18.13	26.4
HORVU7Hr1G002600.1	Barley	golgi, plasma membrane, vacuole	46.7	24.15
HORVU5Hr1G002560.1	Barley	endoplasmic reticulum	34.07	23.75
HORVU6Hr1G000600.1	Barley	plasma membrane	40.11	20.51
CDY00079	Canola	extracellular	9.34	20.24
HORVU7Hr1G019700.4	Barley	plasma membrane	38.46	19.61
HORVU7Hr1G002200.2	Barley	plasma membrane	37.91	18.75
HORVU7Hr1G023000.2	Barley	golgi	25.82	16.32
HORVU5Hr1G067230.40	Barley	mitochondrion	42.31	15.25
HORVU2Hr1G121210.3	Barley	golgi, plasma membrane	28.02	14.09
HORVU3Hr1G040230.1	Barley	plasma membrane	29.12	13.77
HORVU7Hr1G023010.2	Barley	plasma membrane	25.82	13.62
HORVU4Hr1G070930.2	Barley	plasma membrane	27.47	13.51
HORVU2Hr1G074250.2	Barley	plasma membrane	26.92	13.35
HORVU2Hr1G124740.1	Barley	plastid	30.22	12.14
HORVU7Hr1G108550.2	Barley	plasma membrane	24.73	11.81
GSMUA_Achr5P04850_001	Banana	plasma membrane	15.93	11.65
HORVU3Hr1G107360.19	Barley	plastid	24.73	9.85
HORVU3Hr1G080200.2	Barley	plasma membrane	21.43	9.33
HORVU2Hr1G121200.2	Barley	extracellular, plasma membrane	4.95	4.92
HORVU5Hr1G002470.1	Barley	golgi	6.59	4.82
VIT_11s0052g00570.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G034530.1	EnsemblPlantsGene:HORVU4Hr1G034530	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:EamA_dom
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF25	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI000B46BD00	UniProt:A0A287NS12	MapMan:24.2.1.5	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A287NS12]

Coordinates

chrchr4H:-:250060939..250062197

Molecular Weight (calculated)

19747.7 Da

IEP (calculated)

10.341

GRAVY (calculated)

0.796

Length

182 amino acids

Sequence
(BLAST)

001: MHLFLGVLNV VLLYTIVYIS VSRNLPLIIC LLVHYRNVRP RFTKEIFAYL FMSALLGALI ARYLFFLGLS YTTATLAATV SNMTPVFTFL IAVLQRSETV
101: DVRSKAGLAK IAGTLAFVGG AILLSLYKGD ALTHIASSSQ EHAGNGTTGA SGSKGRWLLG TALLLLNCIT FSLWMLLQGK LT

Best Arabidopsis Sequence Match ( AT3G30340.2 )
(BLAST)

001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSVSN PIYYLINLQD LYVNIYKILF

Arabidopsis Description

WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.