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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • golgi 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70995
CDX88803
CDX92368
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G01430.1 CDX70995 AT5G22290.1 21798944
AT4G01430.1 CDX88803 AT5G22290.1 21798944
AT4G01430.1 CDX92368 AT5G22290.1 21798944
AT4G01430.1 CDY09128 AT5G22290.1 21798944
AT4G01430.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97244 Canola endoplasmic reticulum, plasma membrane 98.43 91.61
CDY70635 Canola plasma membrane 58.82 59.52
AT4G01430.1 Thale cress plasma membrane 80.0 55.89
CDX90005 Canola plasma membrane 70.98 49.86
CDY15204 Canola plasma membrane 70.59 49.59
CDY55329 Canola plasma membrane 67.84 47.92
CDY32447 Canola plasma membrane 56.08 47.67
CDY01937 Canola extracellular, plasma membrane, vacuole 22.75 46.4
CDY32446 Canola plasma membrane 59.22 41.03
CDY37472 Canola cytosol, golgi, plasma membrane 59.22 41.03
CDY69734 Canola plasma membrane 45.49 38.67
CDX97249 Canola plasma membrane 49.02 34.53
CDY01936 Canola plasma membrane 48.63 34.25
CDY51711 Canola plasma membrane 48.24 33.88
CDX97247 Canola plasma membrane 47.84 33.8
CDY07144 Canola plasma membrane 48.24 33.79
CDY00079 Canola extracellular 10.98 33.33
CDX74381 Canola plasma membrane 47.06 32.97
CDX83041 Canola plasma membrane 41.57 32.92
CDX91849 Canola plasma membrane 46.67 32.87
KRH04198 Soybean extracellular, plasma membrane, vacuole 31.37 31.87
CDX68485 Canola plasma membrane 40.0 31.78
CDX74385 Canola plasma membrane 45.1 31.77
CDX91847 Canola plasma membrane 40.39 28.85
CDY60103 Canola plasma membrane 12.16 28.7
KRH36123 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.82 28.53
VIT_01s0010g03450.t01 Wine grape plasma membrane 40.39 28.45
KRG90631 Soybean plasma membrane 38.04 28.03
CDX91850 Canola plasma membrane 32.55 27.95
VIT_01s0010g03480.t01 Wine grape plasma membrane 39.61 27.9
Solyc04g007590.1.1 Tomato nucleus 37.65 27.67
CDY45904 Canola plasma membrane 38.82 27.27
CDY35779 Canola plasma membrane 38.43 27.0
TraesCS5D01G032500.1 Wheat extracellular, golgi, plasma membrane 28.63 26.84
PGSC0003DMT400015286 Potato plasma membrane 38.43 26.63
CDY66443 Canola plasma membrane 37.65 26.45
TraesCS1B01G041700.1 Wheat plasma membrane 32.16 25.71
GSMUA_Achr7P04640_001 Banana extracellular, golgi, vacuole 32.55 25.62
KRG89109 Soybean plasma membrane 37.65 25.07
TraesCS5D01G021800.1 Wheat plasma membrane 32.16 24.7
Zm00001d054085_P001 Maize plasma membrane 33.33 24.57
KRH40897 Soybean plasma membrane 36.86 24.54
TraesCS6A01G008700.1 Wheat plasma membrane 33.33 24.29
TraesCS6D01G009900.2 Wheat plasma membrane 33.33 24.29
TraesCS5A01G015800.1 Wheat plasma membrane 31.37 24.24
HORVU6Hr1G000500.17 Barley plasma membrane 34.12 24.17
EER87714 Sorghum endoplasmic reticulum, plasma membrane, plastid 33.73 24.09
TraesCS6B01G015400.1 Wheat plasma membrane 32.55 23.92
TraesCS6D01G009800.1 Wheat plasma membrane 32.94 23.86
TraesCS4D01G164600.1 Wheat plasma membrane 25.49 23.72
EER87705 Sorghum plasma membrane 34.12 23.71
TraesCS6A01G008800.2 Wheat plasma membrane 32.55 23.65
TraesCS6D01G044200.1 Wheat plasma membrane 30.59 23.64
HORVU5Hr1G002560.1 Barley endoplasmic reticulum 23.92 23.37
Os06t0109300-01 Rice golgi, plasma membrane 32.94 23.33
Os04t0422300-01 Rice plasma membrane 34.12 23.26
GSMUA_Achr1P06340_001 Banana extracellular, golgi 32.16 23.23
TraesCS5B01G014100.1 Wheat plasma membrane 31.37 22.99
OQU84142 Sorghum plasma membrane 33.73 22.93
Zm00001d054081_P001 Maize plasma membrane 31.37 22.86
OQU75691 Sorghum plasma membrane 31.37 22.6
EES04319 Sorghum extracellular, golgi, plasma membrane 32.16 22.59
Os06t0107600-01 Rice plasma membrane 32.16 22.59
Os02t0103500-00 Rice endoplasmic reticulum, plasma membrane 33.33 22.55
TraesCS4A01G464200.1 Wheat golgi, plasma membrane, vacuole 30.59 22.29
TraesCS7D01G022700.1 Wheat golgi, plasma membrane, vacuole 30.59 22.29
TraesCS4B01G086600.1 Wheat plasma membrane 30.98 22.25
HORVU6Hr1G000600.1 Barley plasma membrane 30.98 22.19
HORVU7Hr1G002600.1 Barley golgi, plasma membrane, vacuole 30.59 22.16
TraesCS7D01G022800.1 Wheat plasma membrane 31.76 22.13
TraesCS4A01G464100.1 Wheat plasma membrane 32.16 22.1
TraesCS7A01G024900.1 Wheat plasma membrane 31.76 22.07
TraesCS6A01G009400.1 Wheat plasma membrane 30.59 22.03
TraesCS6B01G014700.1 Wheat plasma membrane 30.59 22.03
TraesCS7A01G020400.1 Wheat plasma membrane 31.76 21.83
TraesCS6D01G012400.1 Wheat plasma membrane 30.2 21.75
TraesCS6B01G015700.1 Wheat plasma membrane 30.2 21.69
Zm00001d045576_P001 Maize plasma membrane 33.73 21.66
TraesCS7D01G016700.1 Wheat golgi, plasma membrane, vacuole 31.37 21.56
TraesCS7A01G024800.1 Wheat extracellular, golgi, mitochondrion, plasma membrane 30.59 21.49
CDY64772 Canola plasma membrane 25.49 21.45
CDY42121 Canola plasma membrane 28.63 21.22
TraesCS4A01G472400.1 Wheat plasma membrane 31.37 21.22
HORVU7Hr1G002200.2 Barley plasma membrane 30.59 21.2
TraesCS7D01G082900.1 Wheat plasma membrane 29.41 21.01
CDY06357 Canola plasma membrane 23.92 20.61
HORVU7Hr1G019700.4 Barley plasma membrane 28.63 20.45
CDX94974 Canola plasma membrane 29.8 19.74
CDX94976 Canola plasma membrane 29.8 19.74
CDY69907 Canola plasma membrane 29.8 19.74
CDY64689 Canola plasma membrane 26.67 19.65
CDY59354 Canola plasma membrane 28.63 19.11
TraesCS7A01G087800.1 Wheat plasma membrane 30.2 19.11
TraesCS4A01G386700.1 Wheat plasma membrane 29.8 18.81
CDY62464 Canola plasma membrane 27.06 18.7
TraesCS6A01G038300.1 Wheat plasma membrane 17.65 18.59
CDX81497 Canola plasma membrane 27.45 18.37
CDY12698 Canola plasma membrane 27.06 18.16
CDY24356 Canola plasma membrane 24.31 17.08
HORVU5Hr1G067230.40 Barley mitochondrion 31.76 16.04
CDX86350 Canola plasma membrane 37.65 15.82
Os06t0109200-01 Rice plasma membrane 21.96 15.64
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 10.59 15.17
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular 10.59 15.17
GSMUA_Achr7P17540_001 Banana plasma membrane 33.33 14.89
CDY62465 Canola extracellular, plasma membrane, vacuole 12.94 13.52
HORVU5Hr1G002470.1 Barley golgi 10.98 11.24
Zm00001d045567_P001 Maize plasma membrane 31.37 10.42
CDY64463 Canola plasma membrane 2.35 4.72
CDX97245 Canola plastid 1.57 3.57
Os02t0103700-01 Rice nucleus 0.0 0.0
Protein Annotations
MapMan:24.2.1.5GO:A0A078JYS3UniProt:A0A078JYS3EnsemblPlants:CDY70787ProteinID:CDY70787ProteinID:CDY70787.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00007518001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF10SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEB167InterPro:WAT1-related
Description
BnaCnng69770DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYS3]
Coordinates
chrLK043326:-:905..2971
Molecular Weight (calculated)
28739.1 Da
IEP (calculated)
9.455
GRAVY (calculated)
0.589
Length
255 amino acids
Sequence
(BLAST)
001: MGSVNALVKK ALDVGVNHMI FAAYRMSISG LILVPFSYIW ERKTRPMLTF MLLCEHFISG LLGASLMQFF FLLGLSYTSP TVAMALNSML PAITFALALI
101: FRIENAQKLK SRAGVLKLIG TLICILGAMF LTFYKGLQVS NPHSHPEAID NITLHNNGHD QAKKWLLGCV YLFTGIVLLS LWMLFQGKLS VKYPCTKYSS
201: TCLMSVFAAF QCAILSLYKS REIEDWIIKD KLVIFVILYA SYMQYIKLAL SRDEE
Best Arabidopsis Sequence Match ( AT1G01070.1 )
(BLAST)
001: MAGDMQGVRV VEKYSPVIVM VMSNVAMGSV NALVKKALDV GVNHMVIGAY RMAISALILV PFAYVLERKT RPQITFRLMV DHFVSGLLGA SLMQFFFLLG
101: LSYTSATVSC ALVSMLPAIT FALALIFRTE NVKILKTKAG MLKVIGTLIC ISGALFLTFY KGPQISNSHS HSHGGASHNN NDQDKANNWL LGCLYLTIGT
201: VLLSLWMLFQ GTLSIKYPCK YSSTCLMSIF AAFQCALLSL YKSRDVNDWI IDDRFVITVI IYAGVVGQAM TTVATTWGIK KLGAVFASAF FPLTLISATL
301: FDFLILHTPL YLGSVIGSLV TITGLYMFLW GKNKETESST ALSSGMDNEA QYTTPNKDND SKSPV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WFU3]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.