Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012488.1-P | Field mustard | plasma membrane | 76.59 | 90.75 |
| CDY62464 | Canola | plasma membrane | 95.09 | 89.16 |
| CDY42121 | Canola | plasma membrane | 72.25 | 72.67 |
| AT1G25270.1 | Thale cress | plasma membrane | 73.7 | 71.83 |
| CDY59354 | Canola | plasma membrane | 77.17 | 69.9 |
| CDY12698 | Canola | plasma membrane | 52.89 | 48.16 |
| CDX81497 | Canola | plasma membrane | 52.89 | 48.03 |
| CDY64463 | Canola | plasma membrane | 17.05 | 46.46 |
| CDY24356 | Canola | plasma membrane | 46.53 | 44.35 |
| PGSC0003DMT400077027 | Potato | plasma membrane | 30.06 | 35.62 |
| CDY00079 | Canola | extracellular | 8.09 | 33.33 |
| Solyc07g015910.2.1 | Tomato | plasma membrane | 37.57 | 33.08 |
| CDY64772 | Canola | plasma membrane | 26.01 | 29.7 |
| CDY01937 | Canola | extracellular, plasma membrane, vacuole | 10.69 | 29.6 |
| CDY06357 | Canola | plasma membrane | 25.14 | 29.39 |
| CDX94976 | Canola | plasma membrane | 31.79 | 28.57 |
| CDY69907 | Canola | plasma membrane | 31.79 | 28.57 |
| CDX94974 | Canola | plasma membrane | 31.5 | 28.31 |
| CDY70635 | Canola | plasma membrane | 20.52 | 28.17 |
| CDX90005 | Canola | plasma membrane | 29.19 | 27.82 |
| CDY15204 | Canola | plasma membrane | 29.19 | 27.82 |
| CDY45904 | Canola | plasma membrane | 28.9 | 27.55 |
| CDY66443 | Canola | plasma membrane | 28.61 | 27.27 |
| CDY32447 | Canola | plasma membrane | 23.41 | 27.0 |
| CDY35779 | Canola | plasma membrane | 28.32 | 27.0 |
| CDY37472 | Canola | cytosol, golgi, plasma membrane | 28.61 | 26.9 |
| CDY32446 | Canola | plasma membrane | 28.61 | 26.9 |
| CDY70787 | Canola | golgi, plasma membrane | 19.65 | 26.67 |
| CDY55329 | Canola | plasma membrane | 27.46 | 26.32 |
| CDX97244 | Canola | endoplasmic reticulum, plasma membrane | 20.81 | 26.28 |
| CDX83041 | Canola | plasma membrane | 24.28 | 26.09 |
| CDY69734 | Canola | plasma membrane | 22.54 | 26.0 |
| CDX91849 | Canola | plasma membrane | 26.88 | 25.69 |
| CDX91850 | Canola | plasma membrane | 21.97 | 25.59 |
| CDX74381 | Canola | plasma membrane | 26.59 | 25.27 |
| CDX68485 | Canola | plasma membrane | 23.41 | 25.23 |
| CDY07144 | Canola | plasma membrane | 26.3 | 25.0 |
| CDY60103 | Canola | plasma membrane | 7.8 | 25.0 |
| CDY51711 | Canola | plasma membrane | 26.01 | 24.79 |
| CDX74385 | Canola | plasma membrane | 25.72 | 24.59 |
| CDX97249 | Canola | plasma membrane | 25.14 | 24.03 |
| CDY01936 | Canola | plasma membrane | 24.86 | 23.76 |
| CDY62465 | Canola | extracellular, plasma membrane, vacuole | 15.9 | 22.54 |
| CDX97245 | Canola | plastid | 7.23 | 22.32 |
| CDX91847 | Canola | plasma membrane | 22.83 | 22.13 |
| CDX97247 | Canola | plasma membrane | 22.25 | 21.33 |
| CDX86350 | Canola | plasma membrane | 28.61 | 16.31 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078JDG6 | UniProt:A0A078JDG6 | EnsemblPlants:CDY64689 | ProteinID:CDY64689 | ProteinID:CDY64689.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00042553001 | PFAM:PF00892 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE6A6A | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g37180DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDG6]
Coordinates
chrLK034522:-:3025..5733
Molecular Weight (calculated)
37943.9 Da
IEP (calculated)
10.171
GRAVY (calculated)
0.747
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEEVKAAIA MLVVQFIFAG MFILFKITAH DGTNLRILVA YRLSFATLFM FPLALIFQRK KRPEFTRRLV LLAFLSGLLG AAIPNILYLP GLVRTSATFS
101: TAASILSPVI TLVLSLAFRM DTLRLGSNEG RAKLLGTLLG VGGALVFVFY KGVLMVFGCN VSVSLCIYVL QKKKNTVFIN VKCVFLQAKI SKEFGGHCWN
201: ISLMNATGSL VCMVVALCSE HNWNQWRLGW NISLLTTVYS GVVVSGLVMP LVAWCIEKKG PLYVTVFSPI RLVIVALVGS FALEETLYLG SLIGAIIMVG
301: GVYLVVWCKM KEKKSVSTTT DHVETNKNIK EVSLGNLSAV NNRDVP
101: TAASILSPVI TLVLSLAFRM DTLRLGSNEG RAKLLGTLLG VGGALVFVFY KGVLMVFGCN VSVSLCIYVL QKKKNTVFIN VKCVFLQAKI SKEFGGHCWN
201: ISLMNATGSL VCMVVALCSE HNWNQWRLGW NISLLTTVYS GVVVSGLVMP LVAWCIEKKG PLYVTVFSPI RLVIVALVGS FALEETLYLG SLIGAIIMVG
301: GVYLVVWCKM KEKKSVSTTT DHVETNKNIK EVSLGNLSAV NNRDVP
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.