Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G028400.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 60.89 | 75.17 |
| Os10t0163130-01 | Rice | plasma membrane | 61.17 | 59.51 |
| TraesCS3A01G339800.1 | Wheat | plasma membrane | 48.88 | 45.93 |
| TraesCS3A01G070300.1 | Wheat | plasma membrane | 42.74 | 44.61 |
| TraesCS5A01G060000.1 | Wheat | plasma membrane | 46.37 | 43.46 |
| TraesCS7A01G461400.1 | Wheat | plasma membrane | 45.53 | 42.45 |
| TraesCS6A01G320900.1 | Wheat | golgi, plasma membrane, vacuole | 31.56 | 41.24 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 36.03 | 38.05 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 36.03 | 36.96 |
| KRH53654 | Soybean | plasma membrane | 36.31 | 34.76 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 19.83 | 33.33 |
| KRH72599 | Soybean | plasma membrane | 35.2 | 32.9 |
| TraesCS5A01G520400.1 | Wheat | plasma membrane | 31.84 | 32.02 |
| KRH16968 | Soybean | plasma membrane | 28.77 | 31.79 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 32.96 | 30.03 |
| TraesCS5A01G520500.1 | Wheat | plasma membrane | 28.49 | 29.91 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 24.58 | 28.95 |
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 29.61 | 27.82 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 30.17 | 27.76 |
| KRH38008 | Soybean | plasma membrane | 23.46 | 27.18 |
| TraesCS2A01G300300.1 | Wheat | plasma membrane | 27.93 | 27.1 |
| TraesCS4A01G041500.1 | Wheat | plasma membrane | 27.93 | 26.04 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 22.07 | 25.65 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 24.86 | 25.43 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 23.18 | 25.15 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 26.54 | 25.07 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 24.3 | 24.58 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 24.02 | 24.57 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 24.58 | 24.24 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 25.98 | 24.22 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 25.42 | 24.2 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 23.18 | 23.65 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 23.46 | 22.64 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 23.18 | 22.62 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 22.91 | 22.1 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 14.25 | 21.07 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 22.07 | 20.95 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 23.18 | 20.6 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 22.63 | 20.05 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G284700.1 | EnsemblPlantsGene:TraesCS4A01G284700 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF130 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:591070502..591074036
Molecular Weight (calculated)
39109.9 Da
IEP (calculated)
10.107
GRAVY (calculated)
0.466
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMFAMESVM LPASMVLVQL FSILLVLLSK LALNIGMRPF VLLAYRNLIG AAAIAPLTFV FERKKAKIPN LIEWGWISMN ATSGVILAMG LYYYGLRGTN
101: ATYSVVFLNL IPIVTSVVAI LLRAEKLVFR KWHGKMKFLG IVTCVGGTMV VSLYKGKMLH HPWPTHLLRS HTQAAAAPAA HHNMVIGTLF LCGSCLGYAF
201: WFIIQVLGGD ADVSVGKPTS IRHRHPHRPS HVRMEAQVGP AAPNHCLLGG IQHRFALVLM SWAVKRRGPI YPSMFNSLAM VATVIMDSTL LGTSIFLGSM
301: IGTVLVIVGL YTFLWGKGKE LQEAISLTKN AGENEDPGDG GEHGEPVLEV RHRGDEIA
101: ATYSVVFLNL IPIVTSVVAI LLRAEKLVFR KWHGKMKFLG IVTCVGGTMV VSLYKGKMLH HPWPTHLLRS HTQAAAAPAA HHNMVIGTLF LCGSCLGYAF
201: WFIIQVLGGD ADVSVGKPTS IRHRHPHRPS HVRMEAQVGP AAPNHCLLGG IQHRFALVLM SWAVKRRGPI YPSMFNSLAM VATVIMDSTL LGTSIFLGSM
301: IGTVLVIVGL YTFLWGKGKE LQEAISLTKN AGENEDPGDG GEHGEPVLEV RHRGDEIA
001: MKFERARPFI AIVFIQCLYA LMSIVAKLAL NKGMSPHVLV AYRMAVASAL ITPFALILER NTRPKLTFKI LLQIAILSLF EPVVEQNLYY SGMKLTTATF
101: TSALCNALPA MTFIMACVFK LEKVTIERRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSNSRGLNGH THAMRIPKQA DIARGSIMLV ASCFSWSCYI
201: ILQAKILAQY KAELSLTALM CIMGMLEATV MGLIWERKNM SVWKINPDVT LLASIYGGLV SGLAYYVIGW ASKERGPVFV SAFNPLSMVL VAILSTFVFL
301: EKVYVGRVIG SVVIVIGIYL VLWGKSKDKG GMLQPNAGCA ETVVKIDQQK VPTPDNNQVV SISYHLMIPK AAARSQE
101: TSALCNALPA MTFIMACVFK LEKVTIERRH SQAKLVGTMV AIGGAMLMTF VKGNVIELPW TSNSRGLNGH THAMRIPKQA DIARGSIMLV ASCFSWSCYI
201: ILQAKILAQY KAELSLTALM CIMGMLEATV MGLIWERKNM SVWKINPDVT LLASIYGGLV SGLAYYVIGW ASKERGPVFV SAFNPLSMVL VAILSTFVFL
301: EKVYVGRVIG SVVIVIGIYL VLWGKSKDKG GMLQPNAGCA ETVVKIDQQK VPTPDNNQVV SISYHLMIPK AAARSQE
Arabidopsis Description
WAT1-related protein At5g13670 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.