Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G346500.2 | Wheat | golgi, plasma membrane, vacuole | 97.75 | 97.75 |
| TraesCS4B01G351700.1 | Wheat | plasma membrane | 96.63 | 96.63 |
| KXG38720 | Sorghum | plasma membrane | 81.46 | 81.92 |
| TraesCS5A01G520500.1 | Wheat | plasma membrane | 78.37 | 81.82 |
| OQU91985 | Sorghum | extracellular, golgi | 50.28 | 71.03 |
| Os10t0197700-00 | Rice | plasma membrane | 78.37 | 66.91 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 28.37 | 47.42 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 43.82 | 44.7 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 42.13 | 44.25 |
| KRH16968 | Soybean | plasma membrane | 36.24 | 39.81 |
| TraesCS3A01G339800.1 | Wheat | plasma membrane | 41.01 | 38.32 |
| KRH53654 | Soybean | plasma membrane | 39.33 | 37.43 |
| TraesCS6A01G320900.1 | Wheat | golgi, plasma membrane, vacuole | 28.65 | 37.23 |
| TraesCS3A01G070300.1 | Wheat | plasma membrane | 34.83 | 36.15 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 39.89 | 36.13 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 30.34 | 35.53 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 38.48 | 35.22 |
| KRH72599 | Soybean | plasma membrane | 37.36 | 34.73 |
| TraesCS7A01G461400.1 | Wheat | plasma membrane | 37.36 | 34.64 |
| TraesCS5A01G060000.1 | Wheat | plasma membrane | 36.52 | 34.03 |
| TraesCS4A01G284700.1 | Wheat | extracellular, golgi, plasma membrane | 32.02 | 31.84 |
| KRH38008 | Soybean | plasma membrane | 26.12 | 30.1 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 27.81 | 28.21 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 25.84 | 27.88 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 23.6 | 27.27 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 26.69 | 27.14 |
| TraesCS2A01G300300.1 | Wheat | plasma membrane | 28.09 | 27.1 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 26.4 | 26.86 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 28.09 | 26.6 |
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 28.37 | 26.51 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 28.37 | 26.3 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 26.4 | 25.9 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 25.56 | 25.71 |
| TraesCS4A01G041500.1 | Wheat | plasma membrane | 27.25 | 25.26 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 26.69 | 25.07 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 28.09 | 24.81 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 25.84 | 24.8 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 16.85 | 24.79 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 27.81 | 24.5 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 24.44 | 23.71 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 24.72 | 23.34 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 23.88 | 22.91 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G520400.1 | EnsemblPlantsGene:TraesCS5A01G520400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF51 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:681135597..681137466
Molecular Weight (calculated)
39272.0 Da
IEP (calculated)
9.994
GRAVY (calculated)
0.628
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSTNVKEW WPAIFMLLIQ IFTTGLMLLT KVVVDSGSLA WTLLTYRFFL GAILAIPLAM FFEKGKLKEL TLKAFIWIFT SALVGFTIPG FAYIGLGDTS
101: PGYAVNFYNI IPIAAFILAV LFRKEPLDMR SLVGNIKVVG TLVCVGGTLV ISLYKGKVLH LWPTNIIGYH PKQAGAAFGH HHVRGTILLI TSSLSLAVWY
201: TVQAQMLKVF PYKYWSTVAT CFVGSIQTAV VGVAMNREKA TWALKWNMSL LTIVYSAILN TAAKFVMISW VVTQRGPTYP AMFCAVTVFF TTILDSLLLG
301: NDLSVGSVLG MFMILAGLYL FLWGKRKESV PPSEENPKEQ MLFQSGDKND KSVANV
101: PGYAVNFYNI IPIAAFILAV LFRKEPLDMR SLVGNIKVVG TLVCVGGTLV ISLYKGKVLH LWPTNIIGYH PKQAGAAFGH HHVRGTILLI TSSLSLAVWY
201: TVQAQMLKVF PYKYWSTVAT CFVGSIQTAV VGVAMNREKA TWALKWNMSL LTIVYSAILN TAAKFVMISW VVTQRGPTYP AMFCAVTVFF TTILDSLLLG
301: NDLSVGSVLG MFMILAGLYL FLWGKRKESV PPSEENPKEQ MLFQSGDKND KSVANV
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.