Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G298200.1 | Wheat | plasma membrane | 97.56 | 97.56 |
| TraesCS2B01G316600.1 | Wheat | plasma membrane | 96.48 | 96.48 |
| HORVU2Hr1G074250.2 | Barley | plasma membrane | 94.04 | 94.55 |
| TraesCS4A01G041500.1 | Wheat | plasma membrane | 87.8 | 84.38 |
| KXG26293 | Sorghum | plasma membrane | 75.07 | 72.51 |
| Zm00001d003716_P001 | Maize | plasma membrane | 73.71 | 71.96 |
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 44.17 | 42.78 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 35.5 | 34.56 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 28.73 | 34.42 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 32.52 | 34.29 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 33.6 | 33.42 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 33.06 | 33.24 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 32.79 | 32.61 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 33.06 | 32.36 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 30.62 | 32.29 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 32.79 | 32.18 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 28.73 | 32.12 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 33.33 | 32.03 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 30.08 | 31.36 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 29.81 | 31.34 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 30.62 | 31.13 |
| TraesCS3A01G070300.1 | Wheat | plasma membrane | 28.18 | 30.32 |
| TraesCS6A01G320900.1 | Wheat | golgi, plasma membrane, vacuole | 21.68 | 29.2 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 16.8 | 29.11 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 31.71 | 28.96 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 31.17 | 28.54 |
| TraesCS5A01G060000.1 | Wheat | plasma membrane | 29.54 | 28.53 |
| TraesCS7A01G461400.1 | Wheat | plasma membrane | 29.27 | 28.12 |
| TraesCS5A01G520400.1 | Wheat | plasma membrane | 27.1 | 28.09 |
| TraesCS4A01G284700.1 | Wheat | extracellular, golgi, plasma membrane | 27.1 | 27.93 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 25.47 | 27.73 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 26.02 | 27.51 |
| TraesCS5A01G520500.1 | Wheat | plasma membrane | 25.2 | 27.27 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 17.89 | 27.27 |
| TraesCS3A01G339800.1 | Wheat | plasma membrane | 27.64 | 26.77 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G300300.1 | EnsemblPlantsGene:TraesCS2A01G300300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF22 | PFAM:PF00892 | SUPFAM:SSF103481 | TMHMM:TMhelix | MapMan:24.2.1.5 |
Description
No Description!
Coordinates
chr2A:+:516024495..516026142
Molecular Weight (calculated)
39643.7 Da
IEP (calculated)
9.228
GRAVY (calculated)
0.625
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIGVGGGAL EAARPVAAMV VVEFIFSALQ IFIKLALDDG MDVRVLVAYR LMFGAAFLCP LAFLIERKKR PPLTVKVVTG LFLCGLFGIT INQNLLVLAI
101: KLTNSTTIVT ALSNLTPQST FIVAILTRME TLKLRKPSGQ AKLGGTLVGL GGAMLLTFYK GPEMLFLRRM AHTGLSHATG DRQLRPQPAA GPRILGSFLA
201: ITSCFSYAIW LTIQAKVGQV YPCHYSIAAL VCLFGAVQST LLALCIHRDA DHWRLGLNIR LYSSAYAGIV ASGSAFPLMS WCLRKKGPLY VAMFGPLIII
301: FVAVMSCIVL DEALHIGIVL GAVLIVAGLY MVLWGKAREE DEQEADAPKL VGQDDELGKG PLPHTNGEA
101: KLTNSTTIVT ALSNLTPQST FIVAILTRME TLKLRKPSGQ AKLGGTLVGL GGAMLLTFYK GPEMLFLRRM AHTGLSHATG DRQLRPQPAA GPRILGSFLA
201: ITSCFSYAIW LTIQAKVGQV YPCHYSIAAL VCLFGAVQST LLALCIHRDA DHWRLGLNIR LYSSAYAGIV ASGSAFPLMS WCLRKKGPLY VAMFGPLIII
301: FVAVMSCIVL DEALHIGIVL GAVLIVAGLY MVLWGKAREE DEQEADAPKL VGQDDELGKG PLPHTNGEA
001: MAKSDMLPFL AMVLVQIGYA GMNITSKMAM EAGMKPLILV AYRQIFATIA TFPVAFFLER KTRPKITLRI LVQVFFCSIT GATGNQVLYF VGLQNSSPTI
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
101: ACALTNLLPA VTFLLAAIFR QETVGIKKAS GQAKVIGTLV CVIGAMVLSF YHGHTIGIGE SKIHWAYAEN ITKHGSSSGH SNFFLGPFLI MAAAVSWAAW
201: FIIQTKMSET FAAPYTSTLL MCLMGSIQCG AIALISDHTI SDWSLSSPLR FISALYAGVV ASALAFCLMS WAMQRKGPLY VSVFSPLLLV VVAIFSWALL
301: EEKLYTGTFM GSALVVIGLY GVLWGKDREV SEKEEEREKV KQQNHKVKSE SNEDIESRLP VASSGNGSTR STSP
Arabidopsis Description
WAT1-related protein At1g09380 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXB4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.