Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G067300.1 | Wheat | plasma membrane | 93.07 | 92.73 |
| TraesCS5A01G060000.1 | Wheat | plasma membrane | 98.18 | 70.42 |
| TraesCS5D01G071500.1 | Wheat | plasma membrane | 94.89 | 68.06 |
| TraesCS3A01G070300.1 | Wheat | plasma membrane | 70.44 | 56.27 |
| TraesCS7A01G461400.1 | Wheat | plasma membrane | 76.64 | 54.69 |
| EES15555 | Sorghum | plasma membrane | 56.2 | 41.07 |
| KXG19110 | Sorghum | plasma membrane | 53.65 | 37.69 |
| Zm00001d045572_P001 | Maize | plasma membrane | 51.46 | 37.3 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 27.37 | 35.21 |
| TraesCS3A01G339800.1 | Wheat | plasma membrane | 47.81 | 34.38 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 36.86 | 33.22 |
| TraesCS4A01G284700.1 | Wheat | extracellular, golgi, plasma membrane | 41.24 | 31.56 |
| KRH53654 | Soybean | plasma membrane | 39.78 | 29.14 |
| TraesCS5A01G520400.1 | Wheat | plasma membrane | 37.23 | 28.65 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 35.04 | 28.32 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 35.4 | 27.79 |
| KRH16968 | Soybean | plasma membrane | 32.48 | 27.47 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 31.75 | 26.36 |
| TraesCS5A01G520500.1 | Wheat | plasma membrane | 32.48 | 26.1 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 37.23 | 25.95 |
| KRH72599 | Soybean | plasma membrane | 36.13 | 25.85 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 36.13 | 25.45 |
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 33.94 | 24.41 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 29.93 | 23.43 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 29.93 | 23.43 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 29.2 | 22.6 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 29.93 | 22.59 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 24.45 | 21.75 |
| TraesCS2A01G300300.1 | Wheat | plasma membrane | 29.2 | 21.68 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 27.37 | 21.37 |
| TraesCS4A01G041500.1 | Wheat | plasma membrane | 29.56 | 21.09 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 28.47 | 21.02 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 28.1 | 20.75 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 27.74 | 20.71 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 28.1 | 20.42 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 29.93 | 20.3 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 29.2 | 19.85 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 27.01 | 19.68 |
| Os05t0357500-00 | Rice | cytosol | 27.74 | 19.59 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 27.37 | 19.53 |
| KRH38008 | Soybean | plasma membrane | 21.9 | 19.42 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 25.55 | 18.47 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 16.06 | 18.18 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G320900.1 | EnsemblPlantsGene:TraesCS6A01G320900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF16 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:555487445..555488269
Molecular Weight (calculated)
28954.5 Da
IEP (calculated)
8.908
GRAVY (calculated)
0.636
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLYYCGLRA TSAAYAVNFL YLIPIATFII AVALRAERLS LVAWASRMKL LGAVVGVAGT MVVTLCKGTH LLLPHLRQSS HANPDVASPH GGRDMAVGTL
101: FLYGSCVSYA LWFVVQAKVT KVFPSRYWAT ALTCAAGSLQ SAVAAAMAVV LAPAGDGHGW ARTWTLRWDL QLATVVYSGV FNTGVTFVLV SWAVERRGPV
201: YPPMFNSLSL VATTAVDAVM LGTDVYLGGV MGAALVVVGL YAFLWGKSKE LAAAKAVNAE QELRCAGDTD DGIA
101: FLYGSCVSYA LWFVVQAKVT KVFPSRYWAT ALTCAAGSLQ SAVAAAMAVV LAPAGDGHGW ARTWTLRWDL QLATVVYSGV FNTGVTFVLV SWAVERRGPV
201: YPPMFNSLSL VATTAVDAVM LGTDVYLGGV MGAALVVVGL YAFLWGKSKE LAAAKAVNAE QELRCAGDTD DGIA
001: MEGVSATMHK LRPYLLMIFL QFGAAGTYIV IMATLNQGQN RYVVIVYRNL VAALVLAPFA LIFERKVRPK MTLSVLWKIM ALGFLEPVLD QGFGYLGMNM
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
101: TSATYTSAIM NILPSVTFII AWILRMEKVN IAEVRSKAKI IGTLVGLGGA LVMTLYKGPL IPLPWSNPNM DQQNGHTNNS QDHNNWVVGT LLILLGCVAW
201: SGFYVLQSIT IKTYPADLSL SALICLAGAV QSFAVALVVE RHPSGWAVGW DARLFAPLYT GIVSSGITYY VQGMVMKTRG PVFVTAFNPL CMILVALIAS
301: FILHEQIHFG CVIGGAVIAA GLYMVVWGKG KDYEVSGLDI LEKNSLQELP ITTKSEDDNK LVSSISDNSN VTIPGGAHSN TSGI
Arabidopsis Description
WAT1-related protein At4g08290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUF1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.