Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G320900.1 | Wheat | golgi, plasma membrane, vacuole | 70.42 | 98.18 |
| TraesCS5D01G071500.1 | Wheat | plasma membrane | 95.81 | 95.81 |
| TraesCS5B01G067300.1 | Wheat | plasma membrane | 67.54 | 93.82 |
| TraesCS7A01G461400.1 | Wheat | plasma membrane | 78.01 | 77.6 |
| TraesCS3A01G070300.1 | Wheat | plasma membrane | 67.02 | 74.64 |
| EES15555 | Sorghum | plasma membrane | 54.45 | 55.47 |
| Zm00001d045572_P001 | Maize | plasma membrane | 52.88 | 53.44 |
| KXG19110 | Sorghum | plasma membrane | 53.66 | 52.56 |
| TraesCS3A01G339800.1 | Wheat | plasma membrane | 48.43 | 48.56 |
| TraesCS4A01G284700.1 | Wheat | extracellular, golgi, plasma membrane | 43.46 | 46.37 |
| TraesCS7A01G109600.1 | Wheat | golgi, plasma membrane, vacuole | 35.34 | 39.82 |
| TraesCS7A01G109400.1 | Wheat | plasma membrane | 35.08 | 38.4 |
| KRH16968 | Soybean | plasma membrane | 31.68 | 37.35 |
| KRH53654 | Soybean | plasma membrane | 36.13 | 36.9 |
| Os05t0357500-00 | Rice | cytosol | 37.43 | 36.86 |
| TraesCS5A01G520400.1 | Wheat | plasma membrane | 34.03 | 36.52 |
| TraesCS6A01G106600.1 | Wheat | golgi, plasma membrane, vacuole | 19.9 | 35.68 |
| KRH72599 | Soybean | plasma membrane | 35.08 | 34.99 |
| KRH72593 | Soybean | cytosol, golgi, plasma membrane | 35.86 | 34.86 |
| TraesCS5A01G015800.1 | Wheat | plasma membrane | 29.58 | 34.24 |
| PGSC0003DMT400001491 | Potato | golgi, plasma membrane, plastid | 26.96 | 33.88 |
| TraesCS5A01G520500.1 | Wheat | plasma membrane | 30.1 | 33.72 |
| Solyc03g080070.2.1 | Tomato | plasma membrane | 33.51 | 32.9 |
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 32.46 | 32.55 |
| TraesCS6A01G008700.1 | Wheat | plasma membrane | 28.8 | 31.43 |
| TraesCS7A01G526900.1 | Wheat | plasma membrane | 25.13 | 31.17 |
| TraesCS4A01G464200.1 | Wheat | golgi, plasma membrane, vacuole | 28.53 | 31.14 |
| TraesCS6A01G009400.1 | Wheat | plasma membrane | 28.27 | 30.51 |
| TraesCS7A01G024800.1 | Wheat | extracellular, golgi, mitochondrion, plasma membrane | 28.53 | 30.03 |
| TraesCS2A01G300300.1 | Wheat | plasma membrane | 28.53 | 29.54 |
| KRH38008 | Soybean | plasma membrane | 23.82 | 29.45 |
| TraesCS4A01G464100.1 | Wheat | plasma membrane | 27.75 | 28.57 |
| TraesCS6A01G038300.1 | Wheat | plasma membrane | 18.06 | 28.51 |
| TraesCS6A01G008800.2 | Wheat | plasma membrane | 26.18 | 28.49 |
| TraesCS7A01G024900.1 | Wheat | plasma membrane | 27.23 | 28.34 |
| TraesCS4A01G041500.1 | Wheat | plasma membrane | 28.27 | 28.12 |
| TraesCS7A01G020400.1 | Wheat | plasma membrane | 27.23 | 28.03 |
| TraesCS7A01G477400.1 | Wheat | plasma membrane | 27.23 | 27.66 |
| TraesCS4A01G472400.1 | Wheat | plasma membrane | 27.23 | 27.59 |
| TraesCS7A01G477500.1 | Wheat | plasma membrane | 27.49 | 27.34 |
| TraesCS3A01G196000.1 | Wheat | plasma membrane | 26.7 | 26.91 |
| TraesCS7A01G087800.1 | Wheat | plasma membrane | 28.27 | 26.8 |
| TraesCS4A01G386700.1 | Wheat | plasma membrane | 28.27 | 26.73 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G060000.1 | EnsemblPlantsGene:TraesCS5A01G060000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF16 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:60125940..60132390
Molecular Weight (calculated)
40687.3 Da
IEP (calculated)
9.674
GRAVY (calculated)
0.632
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGHDGDVAV MAVAEDEARR RRRRQAERVA LPAGMVLVQV LTVVTMLLSK VALNSGMHPL VLLVYRNLFP AAFVAPLAVV FEREMWKKVN LRVLGWISLN
101: ATLGVLLAMG LYYCGLRATS AAYAVNFLNL IPIATFIIAV ALRAERLSLV AWASRMKLLG AVMGVAGTMV VTLCKGTHLL LPHLRQSSHA NPDVASPHGG
201: RDMAVGTLFL CGSCVSYALW FVVQAKVAKV FPSRYWATAL TCAAGSLQSA VAAAMAVVLA PAGDGHGWAR TWTLRWDLQL ATVVYSGVFN TGVTFVLVSW
301: AVERRGPVYP PMFNSLSLVA TTAVDAVVLG TDVYLGGVMG AALVVVGLYA FLWGKSKELA AAKAVNAEQE LRCAGDTDDG IA
101: ATLGVLLAMG LYYCGLRATS AAYAVNFLNL IPIATFIIAV ALRAERLSLV AWASRMKLLG AVMGVAGTMV VTLCKGTHLL LPHLRQSSHA NPDVASPHGG
201: RDMAVGTLFL CGSCVSYALW FVVQAKVAKV FPSRYWATAL TCAAGSLQSA VAAAMAVVLA PAGDGHGWAR TWTLRWDLQL ATVVYSGVFN TGVTFVLVSW
301: AVERRGPVYP PMFNSLSLVA TTAVDAVVLG TDVYLGGVMG AALVVVGLYA FLWGKSKELA AAKAVNAEQE LRCAGDTDDG IA
001: MADNTDNRRS LWGVPEKLQL HIAMLTLQFG YAGFHVVSRA ALNMGISKLV FPVYRNIIAL LLLLPFAYFL EKKERPAITL NFLIQFFFLA LIGITANQGF
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
101: YLLGLDNTSP TFASSMQNSV PAITFLMAAL LRIEKVRINR RDGISKILGT ALCVAGASVI TLYKGPTIYT PASHLHAHLL TTNSAVLAPL GNAAPKNWTL
201: GCIYLIGHCL SWSGWLVFQA PVLKSYPARL SVTSYTCFFG IIQFLIIAAF CERDSQAWVF HSGWELFTIL YAGIVASGIA FAVQIWCIDR GGPVFVAVYQ
301: PVQTLVVAIM ASIALGEEFY LGGIIGAVLI IAGLYFVLYG KSEERKFAAL EKAAIQSSAE HGIERAPVSR NSIKSSITTP LLHQSTDNV
Arabidopsis Description
WAT1Protein WALLS ARE THIN 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AP3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.