Factsheet for TraesCS2B01G316600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G298200.1	Wheat	plasma membrane	96.75	96.75
TraesCS2A01G300300.1	Wheat	plasma membrane	96.48	96.48
HORVU2Hr1G074250.2	Barley	plasma membrane	93.77	94.28
TraesCS4B01G262500.1	Wheat	plasma membrane	86.99	77.35
KXG26293	Sorghum	plasma membrane	75.07	72.51
Zm00001d003716_P001	Maize	plasma membrane	73.44	71.69
TraesCS2B01G611600.1	Wheat	plasma membrane	45.26	43.6
TraesCS3B01G227600.1	Wheat	extracellular, golgi, plasma membrane	36.59	35.06
TraesCS7B01G379400.1	Wheat	plasma membrane	33.33	32.71
TraesCS7B01G379300.1	Wheat	plasma membrane	33.33	32.71
TraesCS4B01G086600.1	Wheat	plasma membrane	31.17	32.39
TraesCS1B01G041700.1	Wheat	plasma membrane	27.91	32.29
TraesCS7B01G388500.1	Wheat	plasma membrane	31.17	31.86
TraesCS4B01G351800.1	Wheat	plasma membrane	23.04	31.84
TraesCS7B01G120500.1	Wheat	extracellular, golgi, plasma membrane	25.75	31.46
TraesCS7B01G379000.1	Wheat	plasma membrane	32.52	31.41
TraesCS6B01G015400.1	Wheat	plasma membrane	29.54	31.41
TraesCS6B01G014700.1	Wheat	plasma membrane	30.08	31.36
TraesCS5B01G014100.1	Wheat	plasma membrane	29.27	31.03
TraesCS6B01G015700.1	Wheat	plasma membrane	29.81	30.99
TraesCS7B01G007600.1	Wheat	extracellular, golgi, plasma membrane	26.02	30.19
TraesCS7B01G007300.1	Wheat	golgi, plasma membrane, vacuole	27.1	29.59
TraesCS5B01G067300.1	Wheat	plasma membrane	21.95	29.45
TraesCS7B01G007400.1	Wheat	plasma membrane	27.1	28.65
TraesCS4B01G028400.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	22.49	28.62
TraesCS3B01G084400.1	Wheat	plasma membrane	28.18	27.88
TraesCS4B01G351700.1	Wheat	plasma membrane	26.83	27.81
TraesCS3B01G371400.1	Wheat	plasma membrane	27.64	26.77

Protein Annotations

EnsemblPlants:TraesCS2B01G316600.1	EnsemblPlantsGene:TraesCS2B01G316600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:EamA_dom	InterPro:WAT1-related
PANTHER:PTHR31218	PANTHER:PTHR31218:SF22	PFAM:PF00892	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.5

Description

No Description!

Coordinates

chr2B:+:451890275..451891921

Molecular Weight (calculated)

39686.6 Da

IEP (calculated)

8.651

GRAVY (calculated)

0.608

Length

369 amino acids

Sequence
(BLAST)

001: MGIGVGGGVL EAARPVAAMV VVEFIFSALQ IFIKLALDDG MDVRVLVAYR LMFGAAFLCP LAFLIERKKR PPLTVKVVTG LFLCGLFGIT INQNLLVLAI
101: KLTNSTTIVT ALSNLTPQST FIVAILTRME TLELRKPSGQ AKLGGTLVGL GGAMLLTFYK GPEMMFLRRM AHTGLSHATG DRQLRPQPAA GPRILGSFLA
201: ITSCFSYAIW LTIQAKVGQV YPCHYSIAAL VCLFGAVQST LLALCIHRDA EQWRLGLNIR LYSSAYAGIV ASGSAFPLMS WCLRKKGPLY VAMFGPLIVV
301: FVAVMSSIVL DEALHIGIVL GAVLIVAGLY MVLWGKAREE DEQEADAPKL VDQDDELGQG SLPQPNGEA

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.