Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G575700.1 | Wheat | plasma membrane | 96.87 | 97.38 |
| TraesCS2D01G586500.1 | Wheat | plasma membrane | 96.34 | 96.85 |
| HORVU2Hr1G124740.1 | Barley | plastid | 93.21 | 78.81 |
| Zm00001d002893_P001 | Maize | golgi, plasma membrane, vacuole | 65.27 | 66.14 |
| Os04t0687800-01 | Rice | plasma membrane | 69.19 | 64.32 |
| KXG27497 | Sorghum | plasma membrane | 65.54 | 63.71 |
| EES11693 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 61.36 | 62.83 |
| Zm00001d002888_P001 | Maize | plasma membrane | 60.31 | 61.76 |
| GSMUA_Achr5P01060_001 | Banana | golgi, plasma membrane, vacuole | 53.79 | 57.22 |
| TraesCS2B01G316600.1 | Wheat | plasma membrane | 43.6 | 45.26 |
| TraesCS4B01G262500.1 | Wheat | plasma membrane | 42.82 | 39.52 |
| TraesCS7B01G379300.1 | Wheat | plasma membrane | 37.08 | 37.77 |
| TraesCS6B01G014700.1 | Wheat | plasma membrane | 34.46 | 37.29 |
| TraesCS7B01G379400.1 | Wheat | plasma membrane | 36.55 | 37.23 |
| TraesCS6B01G015700.1 | Wheat | plasma membrane | 33.94 | 36.62 |
| TraesCS3B01G227600.1 | Wheat | extracellular, golgi, plasma membrane | 36.55 | 36.36 |
| TraesCS6B01G015400.1 | Wheat | plasma membrane | 32.64 | 36.02 |
| TraesCS1B01G041700.1 | Wheat | plasma membrane | 29.5 | 35.42 |
| TraesCS7B01G379000.1 | Wheat | plasma membrane | 34.99 | 35.08 |
| TraesCS5B01G014100.1 | Wheat | plasma membrane | 31.59 | 34.77 |
| TraesCS4B01G086600.1 | Wheat | plasma membrane | 31.59 | 34.08 |
| TraesCS3B01G084400.1 | Wheat | plasma membrane | 32.64 | 33.51 |
| TraesCS4B01G028400.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 24.8 | 32.76 |
| TraesCS5B01G067300.1 | Wheat | plasma membrane | 23.5 | 32.73 |
| TraesCS7B01G388500.1 | Wheat | plasma membrane | 30.55 | 32.41 |
| TraesCS3B01G371400.1 | Wheat | plasma membrane | 32.11 | 32.28 |
| TraesCS4B01G351800.1 | Wheat | plasma membrane | 22.45 | 32.21 |
| TraesCS7B01G007600.1 | Wheat | extracellular, golgi, plasma membrane | 25.33 | 30.5 |
| TraesCS7B01G007300.1 | Wheat | golgi, plasma membrane, vacuole | 25.85 | 29.29 |
| TraesCS7B01G120500.1 | Wheat | extracellular, golgi, plasma membrane | 22.45 | 28.48 |
| TraesCS4B01G351700.1 | Wheat | plasma membrane | 26.37 | 28.37 |
| TraesCS7B01G007400.1 | Wheat | plasma membrane | 25.85 | 28.37 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G611600.1 | EnsemblPlantsGene:TraesCS2B01G611600 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom | InterPro:WAT1-related |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | PFAM:PF00892 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:790693738..790697114
Molecular Weight (calculated)
41529.7 Da
IEP (calculated)
9.648
GRAVY (calculated)
0.548
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVGVMEGMK PVAAMVVVQF VFAGVNIFYK LAVSDGMDMR VLVAYRFLFA SAVLSPIAYF VERKKRTKVT WRVLLLSFVC GLCGGSLAQN LYISGMKLTS
101: ATFASAMTNL IPAITFVLAV LFRYERLAIR TLAGLAKVTG TLLGVGGAML LTFYKGAQVT PWPPTHINLA AQLAARHQHE EHASSSLHPD SGNRAMGCLL
201: CTGSCFFYAL WLILQARLSR EYPFHYSTTA LMCGMSALQS AAFALCFDRD LIQWRLSSGV RLLAVLYTGV VASGVMLVVL SWCVKRRGPL FASVFNPMML
301: VVVAVLSSLL LGEELHLGSV LGAVLIVLGL YSVLWGKGRE AVEHEPAKAR AAGTELPHID IVVHRHDPPP TPQQQSTEPG PAR
101: ATFASAMTNL IPAITFVLAV LFRYERLAIR TLAGLAKVTG TLLGVGGAML LTFYKGAQVT PWPPTHINLA AQLAARHQHE EHASSSLHPD SGNRAMGCLL
201: CTGSCFFYAL WLILQARLSR EYPFHYSTTA LMCGMSALQS AAFALCFDRD LIQWRLSSGV RLLAVLYTGV VASGVMLVVL SWCVKRRGPL FASVFNPMML
301: VVVAVLSSLL LGEELHLGSV LGAVLIVLGL YSVLWGKGRE AVEHEPAKAR AAGTELPHID IVVHRHDPPP TPQQQSTEPG PAR
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.