Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P01060_001 | Banana | golgi, plasma membrane, vacuole | 44.22 | 47.78 |
| GSMUA_Achr9P16660_001 | Banana | golgi, plasma membrane, vacuole | 33.42 | 34.57 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 33.16 | 34.4 |
| GSMUA_Achr7P04640_001 | Banana | extracellular, golgi, vacuole | 25.96 | 31.17 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular | 13.88 | 30.34 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular | 13.88 | 30.34 |
| GSMUA_Achr1P06340_001 | Banana | extracellular, golgi | 25.19 | 27.76 |
| GSMUA_Achr5P04850_001 | Banana | plasma membrane | 15.42 | 24.1 |
| GSMUA_Achr7P17540_001 | Banana | plasma membrane | 26.48 | 18.04 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P13070_001 | EnsemblPlants:GSMUA_Achr6T13070_001 | EnsemblPlantsGene:GSMUA_Achr6G13070_001 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF7 | PFAM:PF00892 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0002957CC5 | UniProt:M0T6K5 | MapMan:24.2.1.5 | : |
Description
Putative Auxin-induced protein 5NG4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G13070_001]
Coordinates
chr6:+:8762038..8766916
Molecular Weight (calculated)
42573.5 Da
IEP (calculated)
8.836
GRAVY (calculated)
0.515
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRDWSEVA QGLKPAAAMV LIQTSFAGVN ILYKLALNDG MDVKVLVAYR YIFAAAFISP VAFFIERKRR PKITWKILGL TFLCGLFGAT FAQNLYVSSM
101: KLTSATFTSA MANLVPAVTF ILAVSFSQFV NFTRTQFYQI TSMNIYLCRF FFFSFPVVIV SLIFSFNLDD HGGHHLAAPH SESGNRVMGS FLAVASCLCY
201: ALWLIIQAKL AEAYPCHYSN AALMCLMGSI QASILALCVE RHRIQWRLGF DIRLLTAAYS GIFASGMSFT LLGWCIKKKG PVYASVFNPL MLLLVAILSS
301: LLLNEKLYLG CLLGAALIVI GLYIVLWGKG REASKIDEES PAEATRESID VAVAQEAATD PGSGNVCDPN IRKGEEVKQK ANKPGCSGF
101: KLTSATFTSA MANLVPAVTF ILAVSFSQFV NFTRTQFYQI TSMNIYLCRF FFFSFPVVIV SLIFSFNLDD HGGHHLAAPH SESGNRVMGS FLAVASCLCY
201: ALWLIIQAKL AEAYPCHYSN AALMCLMGSI QASILALCVE RHRIQWRLGF DIRLLTAAYS GIFASGMSFT LLGWCIKKKG PVYASVFNPL MLLLVAILSS
301: LLLNEKLYLG CLLGAALIVI GLYIVLWGKG REASKIDEES PAEATRESID VAVAQEAATD PGSGNVCDPN IRKGEEVKQK ANKPGCSGF
001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP
Arabidopsis Description
WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.