Factsheet for VIT_04s0044g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00410.t01	Wine grape	plasma membrane	90.65	98.98
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	71.03	98.7
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	29.21	95.42
VIT_04s0044g00360.t01	Wine grape	plasma membrane	54.67	73.12
VIT_04s0044g00420.t01	Wine grape	plastid	63.55	69.92
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	25.47	68.55
VIT_04s0044g00380.t01	Wine grape	plasma membrane	63.08	61.64
VIT_04s0044g00460.t01	Wine grape	plasma membrane	41.82	56.29
VIT_04s0044g00480.t01	Wine grape	mitochondrion	31.31	51.74
VIT_11s0052g00570.t01	Wine grape	extracellular	6.54	35.0
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	27.1	31.52
VIT_01s0010g03450.t01	Wine grape	plasma membrane	25.47	30.11
VIT_01s0010g03480.t01	Wine grape	plasma membrane	25.47	30.11

Protein Annotations

EntrezGene:100253907	wikigene:100253907	MapMan:24.2.1.5	ProteinID:CBI37617	ProteinID:CBI37617.3	UniProt:D7U441
InterPro:EamA_dom	EMBL:FN596506	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EntrezGene:LOC100253907	wikigene:LOC100253907	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF7
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE4E5A	ArrayExpress:VIT_04s0044g00390	EnsemblPlantsGene:VIT_04s0044g00390	EnsemblPlants:VIT_04s0044g00390.t01
InterPro:WAT1-related	RefSeq:XP_003631933	RefSeq:XP_003631933.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:21129635..21141708

Molecular Weight (calculated)

46216.9 Da

IEP (calculated)

9.295

GRAVY (calculated)

0.699

Length

428 amino acids

Sequence
(BLAST)

001: MATGKLRNLL EGLKPAMTMV IVQIIFGGLN IMYKLARNDG MSMKILVAYR NIFATAIMVP LALIFEGKSR PKLTWMIFLQ GSLCGLFGGS LGQNLYAESL
101: SLTSATFVAA MTNLVPAMTF VMAVFLRMER LAIGTIAGKA KLMGTIMSLG GVMILTFYKG VEIKLWSTNI NLLHHGAAAL QESSPNQVLG SLLAVASCVC
201: IAVWLIVQTK MSMVYPSYSG TALMCVCASI QSVVYAMCTE RDWSAWKLGW DIRLLTVVYS GVLASGLMVT LMTWVSRMRG PLFVSSFFPL MLVTVAILGS
301: LLLHEQLHIG SIIAAVLIIV GLYIVLWGKG KEMKQTAQIH AAQSFSEQDL RHIVIENSSN SECKPEASGI IGPIEPADLG SGVPSAAAVS IQTASPTASF
401: ASYIVIGLSY KQLFSWYITW LVGSFGMS

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.