Factsheet for VIT_04s0044g00360.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
golgi 4
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00420.t01	Wine grape	plastid	94.06	77.38
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	31.25	76.34
VIT_04s0044g00380.t01	Wine grape	plasma membrane	97.19	71.0
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	32.81	66.04
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	61.25	63.64
VIT_04s0044g00410.t01	Wine grape	plasma membrane	73.75	60.2
VIT_04s0044g00480.t01	Wine grape	mitochondrion	44.38	54.83
VIT_04s0044g00390.t01	Wine grape	plasma membrane	73.12	54.67
VIT_04s0044g00460.t01	Wine grape	plasma membrane	43.12	43.4
VIT_11s0052g00570.t01	Wine grape	extracellular	8.44	33.75
VIT_01s0010g03450.t01	Wine grape	plasma membrane	29.38	25.97
VIT_01s0010g03480.t01	Wine grape	plasma membrane	29.06	25.69
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	29.38	25.54

Protein Annotations

MapMan:24.2.1.5	ProteinID:CCB60460	ProteinID:CCB60460.1	InterPro:EamA_dom	UniProt:F6I0J4	EMBL:FN596506
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000210A7D5	ArrayExpress:VIT_04s0044g00360
EnsemblPlantsGene:VIT_04s0044g00360	EnsemblPlants:VIT_04s0044g00360.t01	InterPro:WAT1-related	SEG:seg	:	:

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F6I0J4]

Coordinates

chr4:+:21087493..21089838

Molecular Weight (calculated)

33985.1 Da

IEP (calculated)

8.264

GRAVY (calculated)

0.685

Length

320 amino acids

Sequence
(BLAST)

001: MTWMIFLQGS LCGLFGGSLG QNLYAESLTL TSATFAAAMT NIIPAMAFVL AIVLRMERLA IGTVAGKSKV LGTLLSISGA LVLTFYKGVE LNLWSTNINL
101: LHHGAATSQQ SSNDQVLGSI LAVVACMCFA VWLIIQAKIS MVYPSYSGTA LTCVCAAIQS VVYAMCAEKE WSAWKLGWNI RLLTVVYTGV WATGLMVAIM
201: SWAARLRGPL FVSSFYPLML VTVAILGSLL LDEQLYLGSI IAVVLIVVGL YGVLWGKGKE MKQNDQIDGA KSSTEPELRG IVIETSSSTK GKPTATSTIC
301: PIQAADRGSG AVSPAAVVHE

Best Arabidopsis Sequence Match ( AT1G25270.1 )
(BLAST)

001: MKSVVAMVAV QFIFAGMFIL FKITVDDGTN LKVLVAYRLS FATIFMLPLA LIFQRKKRPE FTWRLLLLAF VSGLLGAAIP NILYLPGMAR TSATFSAASS
101: IISPLITLVL GLVFRMETLR LGSNEGRAKL VGTLLGACGA LVFVFYKGIE IHIWSTHVDL LKGSHTGRAT TNHHVSILGV LMVLGSNVST SLWLLLQAKI
201: GKELGGLYWN TSLMNGVGSL VCVIIALCSD HDWEQWQLGW DINLLATLYS GIVVSGMVVP LVAWCIATKG PLFVTVFSPI RLVIVALIGS FALEEPLHLG
301: SIIGAMIMVG GVYLVVWCKM KEKKSASTTS DHIETNKNNK ELDLGNLSSV NRDVP

Arabidopsis Description

WAT1-related protein At1g25270 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT23]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.