Factsheet for VIT_04s0044g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0044g00360.t01	Wine grape	plasma membrane	71.0	97.19
VIT_04s0044g00420.t01	Wine grape	plastid	82.42	92.8
VIT_04s0044g00350.t01	Wine grape	extracellular, golgi, vacuole	22.83	76.34
VIT_04s0044g00370.t01	Wine grape	extracellular, golgi	53.2	75.65
VIT_04s0044g00410.t01	Wine grape	plasma membrane	61.64	68.88
VIT_04s0044g00430.t01	Wine grape	endoplasmic reticulum, extracellular	23.52	64.78
VIT_04s0044g00390.t01	Wine grape	plasma membrane	61.64	63.08
VIT_04s0044g00480.t01	Wine grape	mitochondrion	32.65	55.21
VIT_04s0044g00460.t01	Wine grape	plasma membrane	38.58	53.14
VIT_11s0052g00570.t01	Wine grape	extracellular	6.16	33.75
VIT_01s0010g03450.t01	Wine grape	plasma membrane	25.34	30.66
VIT_01s0010g03480.t01	Wine grape	plasma membrane	25.34	30.66
VIT_02s0025g03180.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	25.34	30.16

Protein Annotations

EntrezGene:100248813	wikigene:100248813	EntrezGene:100255715	wikigene:100255715	EntrezGene:100853924	wikigene:100853924
MapMan:24.2.1.5	ProteinID:CBI37618	ProteinID:CBI37618.3	UniProt:D7U442	InterPro:EamA_dom	EMBL:FN596506
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100248813
wikigene:LOC100248813	EntrezGene:LOC100255715	wikigene:LOC100255715	EntrezGene:LOC100853924	wikigene:LOC100853924	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0001BE4E5B	ArrayExpress:VIT_04s0044g00380
EnsemblPlantsGene:VIT_04s0044g00380	EnsemblPlants:VIT_04s0044g00380.t01	InterPro:WAT1-related	RefSeq:XP_002271697	RefSeq:XP_002271697.1	RefSeq:XP_002271832
RefSeq:XP_002271832.1	RefSeq:XP_003631932	RefSeq:XP_003631932.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:21120003..21127168

Molecular Weight (calculated)

47458.0 Da

IEP (calculated)

8.915

GRAVY (calculated)

0.543

Length

438 amino acids

Sequence
(BLAST)

001: MVVVQVSLGG INIMYKLAKS DGMSMNVLIA YRYIFAAAFT APLALIFDRK SRQKMTWMIF LQGSLCGLFG GSLGQNLYAE SLTLTSATFA AAMTNIIPAM
101: AFVLAIVLRM ERLAIGTVAG KSKVLGTLLS ISGALVLTFY KGVELNLWST NINLLHHGAA TSQQSSNDQV LGSILAVVAC MCFAVWLIIQ AKISMVYPSY
201: SGTALTCVSA AIQSVVYAMC AEKKWSAWKL GWDIRLLTVV YTGVWATGLM VAIMSWAARL RGPLFVSSFY PLMLVTVAIL GSLLLDEQLY LGSIIAVVLI
301: VVGLYGVLWG KGKEMKQNAQ VDGAKSSTEP ELRGIVIETS SSTKGKPTAT STICPIQAAD RGSGAVVLCH LLELEEFPKD RHALRMNEFD KIGKWKELYK
401: LDVSSPLCGK SLSMNMLDTC DSIGEIVFVT HKKIFSCE

Best Arabidopsis Sequence Match ( AT1G68170.1 )
(BLAST)

001: MKDITAMVVV QIATAGLNIF FKLAMEDGMN PSVLVAYRLL FATLFMIPIC FIFQRKKRPE FTCRLMLLAL LSGLLGVVIP SILTITGLAL TSATFTSAAG
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP

Arabidopsis Description

nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G68170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.