Factsheet for Bra033954.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
golgi 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12698	Canola	plasma membrane	98.2	71.84
AT1G68170.2	Thale cress	plasma membrane	77.7	59.02
Bra012488.1-P	Field mustard	plasma membrane	47.12	44.86
Bra024767.1-P	Field mustard	plasma membrane	56.12	42.86
Bra002077.1-P	Field mustard	plasma membrane	51.8	39.67
Solyc07g015910.2.1	Tomato	plasma membrane	41.73	29.52
PGSC0003DMT400077027	Potato	plasma membrane	30.58	29.11
Bra032618.1-P	Field mustard	plasma membrane	31.65	23.91
Bra031664.1-P	Field mustard	plasma membrane	31.3	23.9
Bra000926.1-P	Field mustard	plasma membrane	27.7	23.55
Bra020026.1-P	Field mustard	plasma membrane	32.01	23.12
Bra020740.1-P	Field mustard	extracellular	16.55	22.77
Bra033290.1-P	Field mustard	plasma membrane	28.78	22.54
Bra037413.1-P	Field mustard	plasma membrane	28.42	21.76
Bra025414.1-P	Field mustard	extracellular, plasma membrane, vacuole	16.19	21.53
Bra032617.1-P	Field mustard	plasma membrane	27.7	21.33
Bra000925.1-P	Field mustard	plasma membrane	25.18	20.41
Bra000923.1-P	Field mustard	plasma membrane	26.26	20.33
Bra008548.1-P	Field mustard	extracellular, plasma membrane	24.46	19.48
Bra008545.1-P	Field mustard	endoplasmic reticulum, plasma membrane	17.99	18.25
Bra036199.1-P	Field mustard	plasma membrane	25.18	17.46
Bra029909.1-P	Field mustard	plasma membrane	15.83	17.39
Bra008546.1-P	Field mustard	cytosol, extracellular, plastid	10.43	12.5

Protein Annotations

EnsemblPlants:Bra033954.1	EnsemblPlants:Bra033954.1-P	EnsemblPlantsGene:Bra033954	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF7	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00025462B5	UniProt:M4EYR2	MapMan:24.2.1.5	:

Description

AT1G68170 (E=1e-046) | nodulin MtN21 family protein

Coordinates

chrA02:+:10640999..10643657

Molecular Weight (calculated)

30326.2 Da

IEP (calculated)

9.670

GRAVY (calculated)

0.855

Length

278 amino acids

Sequence
(BLAST)

001: MATKICEMWR EMKAITAMVV VQIATAVLNI LFKLAVVDGM EPRVLVAYRL FFATLFMIPL SLIFQREKRP EFTWNLLLLA LLSGLLGAVL PSIFTITGLA
101: LTSATFASAA AVLTPLITFV KVGKQFGGAY WNATLMNLTG SVVAVIIVLC WNCDLKEWKL GWNIRLFTIA YASIVMSGMV IAVNAWCVES RGPLFVSVFS
201: PVALVVVALV GSFILNETLH VGSIIGTVII VGGLYLVLWG KNKEMKSITP TSDYIETNKT TSKDISLKNL PTLSTNVP

Best Arabidopsis Sequence Match ( AT1G68170.1 )
(BLAST)

001: MKDITAMVVV QIATAGLNIF FKLAMEDGMN PSVLVAYRLL FATLFMIPIC FIFQRKKRPE FTCRLMLLAL LSGLLGVVIP SILTITGLAL TSATFTSAAG
101: VLTPLVTFIF AALLRMESVR LGSSVGLAKV FGTLFGVGGA LVFIFYRGIE IRLWSTHVNL VNQPRDSSRD ATTHHISILG ALLVFGGNIS ISLWFLLQVK
201: ISKQFGGPYW NATLMNMMGG VVAMLVALCW EHDLDEWRLG WNIRLLTIAY AAILISGMVV AVNAWCIESR GPLFVSVFSP VGLVIVALVG SFLLDETLHL
301: GSIIGTVIIV GALYIVLWAK NKEMKSMLTT SDHNETNKTS KDITVNNLPT LSTNVP

Arabidopsis Description

nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G68170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.