Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 96.8 | 96.8 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 89.04 | 89.04 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 57.08 | 62.19 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 57.08 | 62.19 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 56.62 | 62.0 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 44.75 | 60.87 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 61.19 | 60.63 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 53.42 | 60.31 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 53.42 | 60.31 |
| KRH42212 | Soybean | plasma membrane | 63.01 | 60.0 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 52.97 | 59.79 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 52.97 | 59.79 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 52.05 | 59.38 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 52.97 | 59.18 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 57.99 | 59.07 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 56.62 | 59.05 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 57.53 | 58.6 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 56.16 | 58.57 |
| KRH58337 | Soybean | plasma membrane | 61.19 | 58.52 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 54.34 | 58.33 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 59.36 | 58.3 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 61.19 | 58.26 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 56.62 | 58.22 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.34 | 58.05 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 57.53 | 57.8 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 57.08 | 57.6 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 51.14 | 57.44 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 52.05 | 57.0 |
| KRH42214 | Soybean | extracellular | 42.92 | 56.97 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 53.42 | 56.8 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 41.1 | 56.6 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 59.82 | 56.22 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.62 | 55.36 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 31.51 | 55.2 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 51.14 | 53.85 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 50.68 | 53.62 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 53.42 | 52.47 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 50.23 | 52.13 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 42.92 | 51.65 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 49.32 | 51.43 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.32 | 51.43 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 50.23 | 51.4 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 48.86 | 50.95 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 48.86 | 50.95 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 49.32 | 50.94 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 52.97 | 50.66 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 48.4 | 50.48 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 48.4 | 50.48 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 48.86 | 50.47 |
| KRH58340 | Soybean | plasma membrane | 53.42 | 49.58 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 51.14 | 48.91 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 46.12 | 47.64 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 38.81 | 47.22 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 48.86 | 46.72 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 41.55 | 45.73 |
| GSMUA_Achr10P... | Banana | plasma membrane | 52.05 | 43.51 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 42.92 | 42.53 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 42.01 | 41.07 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 38.36 | 40.58 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 37.44 | 39.81 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 42.47 | 39.24 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.16 | 37.75 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 35.62 | 37.14 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 43.38 | 35.32 |
Protein Annotations
| EnsemblPlants:CDY15107 | EnsemblPlantsGene:GSBRNA2T00085262001 | GO:A0A078FQH9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF6 | PFAM:PF01988 | ProteinID:CDY15107 | ProteinID:CDY15107.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EC615E | UniProt:A0A078FQH9 | MapMan:24.2.12.3 | : |
Description
BnaC03g44680DBnaC03g44680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQH9]
Coordinates
chrLK032051:-:604345..605511
Molecular Weight (calculated)
23313.7 Da
IEP (calculated)
8.219
GRAVY (calculated)
0.332
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNFELSER SSPKQHRISP RADKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRASETKTS LPAIDEQYEE EKKERLPNPG QAALASALAF SVGAAMPLLA AVFIENHKVR MAVVAIVATL ALLVFGVTGA VLGKTSVFKS SVRVVIGGWM
201: AMALTFGLTK FIGSEAMQI
101: MKRASETKTS LPAIDEQYEE EKKERLPNPG QAALASALAF SVGAAMPLLA AVFIENHKVR MAVVAIVATL ALLVFGVTGA VLGKTSVFKS SVRVVIGGWM
201: AMALTFGLTK FIGSEAMQI
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
Arabidopsis Description
Vacuolar iron transporter homolog 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF6]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.