Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 91.26 | 97.92 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 85.44 | 83.81 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 84.95 | 83.33 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 85.44 | 83.02 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 73.3 | 82.97 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 79.61 | 78.85 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 76.21 | 75.85 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 77.67 | 75.47 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 76.21 | 73.36 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 78.64 | 70.74 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 64.08 | 64.71 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 58.74 | 62.37 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 58.74 | 62.37 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 58.74 | 62.37 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 58.74 | 62.37 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 60.19 | 62.0 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 58.25 | 61.86 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 58.25 | 61.86 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 59.71 | 61.5 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 58.25 | 61.22 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 60.19 | 59.05 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 57.28 | 59.0 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 57.28 | 59.0 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 55.83 | 58.97 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 57.28 | 58.71 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 57.28 | 58.71 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 57.28 | 58.71 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 55.83 | 58.08 |
| KRH35158 | Soybean | plasma membrane | 55.34 | 57.58 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 55.34 | 57.0 |
| Bra016431.1-P | Field mustard | cytosol | 30.1 | 56.36 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 42.72 | 54.66 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 54.37 | 54.63 |
| Solyc04g051180.1.1 | Tomato | extracellular | 43.69 | 54.55 |
| VIT_18s0076g00320.t01 | Wine grape | cytosol, peroxisome, vacuole | 58.25 | 54.3 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 56.8 | 53.42 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 58.74 | 53.3 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 54.85 | 53.05 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 56.31 | 52.97 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 55.83 | 52.51 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 55.83 | 52.51 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 54.37 | 52.09 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 54.37 | 52.09 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 54.85 | 52.07 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 55.34 | 52.05 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 55.83 | 52.04 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 58.74 | 51.93 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 52.91 | 51.9 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.31 | 51.79 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 54.37 | 51.61 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 49.03 | 51.53 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 55.34 | 51.12 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 53.88 | 50.92 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 56.8 | 50.87 |
| KRH42212 | Soybean | plasma membrane | 56.31 | 50.43 |
| KRH58337 | Soybean | plasma membrane | 55.83 | 50.22 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 57.77 | 49.79 |
| KRH42214 | Soybean | extracellular | 39.81 | 49.7 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 50.49 | 49.06 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 55.34 | 48.93 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 51.46 | 48.85 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 37.38 | 48.43 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 53.88 | 48.05 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 52.43 | 47.16 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 47.57 | 46.45 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 49.51 | 45.74 |
| GSMUA_Achr10P... | Banana | plasma membrane | 57.77 | 45.42 |
| KRH58340 | Soybean | plasma membrane | 51.94 | 45.34 |
| KRH10486 | Soybean | plasma membrane | 40.29 | 44.86 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 50.0 | 43.64 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 53.4 | 40.89 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 40.29 | 40.29 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 34.47 | 39.44 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 37.86 | 38.24 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 33.5 | 32.86 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G610400.1 | EnsemblPlantsGene:TraesCS2B01G610400 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:789964609..789965229
Molecular Weight (calculated)
20685.4 Da
IEP (calculated)
8.054
GRAVY (calculated)
0.674
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNDTKLAD AENPGAMCRG GDADSDVDFA GRANWLRAAV LGANDGLVST ASLMLGVGAV KHEVRAMVIS GFAGLLAGAC SMAIGEFVSV CSQRDVEIAQ
101: LDRDGKRGGD EERALPSPVQ AAAASALAFS VGALLPLLAA GFIVGYKLRV AVVVAVATLA LAAFGVVGAV LGRAPVVRSS ARVVVGGLAA MGLTFGLMRL
201: FRASGI
101: LDRDGKRGGD EERALPSPVQ AAAASALAFS VGALLPLLAA GFIVGYKLRV AVVVAVATLA LAAFGVVGAV LGRAPVVRSS ARVVVGGLAA MGLTFGLMRL
201: FRASGI
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.