CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35158	Soybean	plasma membrane	83.11	91.92
VIT_18s0076g00320.t01	Wine grape	cytosol, peroxisome, vacuole	78.54	77.83
KRH08706	Soybean	cytosol, peroxisome, vacuole	79.45	74.68
PGSC0003DMT400008929	Potato	cytosol, peroxisome, vacuole	75.8	73.13
Solyc04g051180.1.1	Tomato	extracellular	54.79	72.73
KRH70313	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	78.08	71.55
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	61.64	66.18
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	66.67	66.06
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	57.99	64.8
KRH58337	Soybean	plasma membrane	67.12	64.19
KRH43941	Soybean	cytosol, peroxisome, vacuole	63.01	63.59
KRH42212	Soybean	plasma membrane	66.21	63.04
KRH28884	Soybean	cytosol, peroxisome, vacuole	61.19	58.26
TraesCS2D01G588000.1	Wheat	cytosol, plasma membrane, vacuole	50.68	57.81
KRH42214	Soybean	extracellular	43.38	57.58
Zm00001d026679_P001	Maize	cytosol, peroxisome, vacuole	54.34	57.49
KRH10486	Soybean	plasma membrane	47.95	56.76
Zm00001d002884_P001	Maize	cytosol, plasma membrane, vacuole	55.25	56.54
TraesCS2B01G610400.1	Wheat	cytosol, plasma membrane, vacuole	52.97	56.31
Os04t0686800-01	Rice	cytosol, peroxisome, vacuole	53.42	56.25
TraesCS2A01G434100.1	Wheat	cytosol, plasma membrane, vacuole	31.96	56.0
KRH76566	Soybean	cytosol, peroxisome, vacuole	59.36	55.79
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	56.16	55.16
TraesCS2D01G431900.1	Wheat	cytosol, plasma membrane, vacuole	52.51	54.76
KRH42215	Soybean	cytosol, plastid, vacuole	57.08	54.59
TraesCS2B01G455100.1	Wheat	cytosol, plasma membrane, vacuole	52.05	54.29
TraesCS2B01G455200.1	Wheat	cytosol, plasma membrane, vacuole	52.05	54.29
TraesCS2A01G434000.1	Wheat	cytosol, plasma membrane, vacuole	52.05	54.29
TraesCS2A01G433900.1	Wheat	cytosol, plasma membrane, vacuole	51.14	53.33
TraesCS2A01G434200.1	Wheat	cytosol, plasma membrane, vacuole	51.14	53.33
TraesCS2B01G455300.1	Wheat	cytosol, plasma membrane, vacuole	51.6	53.3
TraesCS2B01G455000.1	Wheat	cytosol, plasma membrane, vacuole	44.29	53.3
TraesCS2D01G432000.1	Wheat	cytosol, plasma membrane, vacuole	51.14	52.83
KRH58340	Soybean	plasma membrane	56.62	52.54
EES11692	Sorghum	cytosol, peroxisome, vacuole	54.79	52.4
GSMUA_Achr10P...	Banana	plasma membrane	60.73	50.76
TraesCS2B01G454900.1	Wheat	cytosol, plasma membrane, vacuole	48.86	50.47
TraesCS4A01G209600.1	Wheat	plasma membrane	45.21	49.75
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	40.64	49.44
HORVU2Hr1G101180.2	Barley	cytosol	50.23	48.03
TraesCS4D01G110600.1	Wheat	cytosol, plasma membrane, vacuole	46.58	46.15
HORVU4Hr1G020210.1	Barley	cytosol, peroxisome	46.12	45.09
Os11t0161900-00	Rice	cytosol, nucleus, plasma membrane	42.47	44.93
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	45.66	42.19
KRH42211	Soybean	cytosol, plasma membrane, vacuole	37.44	39.05
TraesCS4B01G112900.1	Wheat	endoplasmic reticulum	47.03	38.29

Protein Annotations

EntrezGene:100814343	MapMan:24.2.12.3	EMBL:ACUP02012695	InterPro:Ccc1_fam	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G166100
GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0005384	GO:GO:0005575	GO:GO:0005623
GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019725	GO:GO:0030026	GO:GO:0034755	GO:GO:0071281	GO:GO:0071421	UniProt:I1NH14
EnsemblPlants:KRG91640	ProteinID:KRG91640	ProteinID:KRG91640.1	PFAM:PF01988	PANTHER:PTHR31851	PANTHER:PTHR31851:SF30
TMHMM:TMhelix	UniParc:UPI000233D8FB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:40377168..40378312

Molecular Weight (calculated)

23428.5 Da

IEP (calculated)

5.319

GRAVY (calculated)

0.297

Length

219 amino acids

Sequence
(BLAST)

001: MASDHSSVNQ PKFVYPNNEL EQQEALEVET KDFDYSKRSQ WLRAAVLGAN DGLVSTASLM MGVGAVKQDI KVMILTGFAG LVAGACSMAI GEFVSVYSQL
101: DIEVAQMKRE KERDNIDQEE DGYEKEKLPN PIHAAAASAL AFSVGALVPL LAASFIRDYK VRLGVILGAV SLALVVFGWL GAVLGKAPTF RSCVRVLLGG
201: WLAMAITFGL TKLIGSSGL

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.