Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- golgi 2
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 87.39 | 86.27 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 71.74 | 74.66 |
| KRH42212 | Soybean | plasma membrane | 73.04 | 73.04 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 60.0 | 70.41 |
| KRH58337 | Soybean | plasma membrane | 70.0 | 70.31 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.83 | 64.88 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.04 | 64.73 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 58.7 | 63.38 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 57.83 | 63.33 |
| KRH35158 | Soybean | plasma membrane | 54.35 | 63.13 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 60.0 | 61.88 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.26 | 61.19 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 58.26 | 61.19 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 58.26 | 61.19 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 58.26 | 61.19 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 56.52 | 60.47 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 57.39 | 60.27 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 56.52 | 59.63 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 41.74 | 59.63 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 55.65 | 59.53 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 56.09 | 59.45 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.13 | 58.85 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 51.74 | 58.33 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 54.35 | 57.6 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 57.83 | 57.08 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 50.87 | 56.8 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 39.13 | 56.6 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 51.3 | 55.92 |
| KRH42214 | Soybean | extracellular | 40.0 | 55.76 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 53.91 | 55.61 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 50.0 | 55.56 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 43.48 | 55.56 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 50.0 | 55.29 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 30.0 | 55.2 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 51.3 | 55.14 |
| KRH58340 | Soybean | plasma membrane | 56.09 | 54.66 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 54.35 | 54.59 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 49.57 | 54.29 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.13 | 53.81 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 49.13 | 53.81 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 49.13 | 53.81 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.65 | 53.56 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 48.7 | 53.33 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 48.7 | 53.33 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 49.13 | 53.3 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 42.17 | 53.3 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 52.36 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 50.87 | 51.09 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 45.65 | 49.53 |
| KRH10486 | Soybean | plasma membrane | 39.57 | 49.19 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 47.39 | 47.6 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 40.0 | 46.23 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 40.43 | 45.15 |
| GSMUA_Achr10P... | Banana | plasma membrane | 50.0 | 43.89 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 41.74 | 43.44 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 42.17 | 43.3 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 38.7 | 43.0 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 39.13 | 42.86 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 37.83 | 42.65 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 41.74 | 40.51 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 42.17 | 36.06 |
Protein Annotations
| EntrezGene:100817158 | MapMan:24.2.12.3 | EMBL:ACUP02006769 | InterPro:Ccc1_fam | EnsemblPlantsGene:GLYMA_11G083300 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 | UniProt:K7LNM9 | EnsemblPlants:KRH28884 |
| ProteinID:KRH28884 | ProteinID:KRH28884.1 | PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | TMHMM:TMhelix |
| UniParc:UPI00023CCF12 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:6254033..6254848
Molecular Weight (calculated)
24525.2 Da
IEP (calculated)
5.819
GRAVY (calculated)
0.463
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLDDDYKT NEISLNHVEI PIHAIGEEPK PYQEVEERNN IDYSQRAQWL RAAVLGANDG LVSVASLMIG IGAVKENITA MLLAGFAGLI AGACSMAIGE
101: FVSVYTQYDI EIAQIKRDKE NNNIGGVGEE LAQREKLPNP FQAALASALA FSVGAVIPLL AAAFIRNYKI RLVVVAVVAT LTLLLFGGVG AVLGKTLVRK
201: SCIRVLIGGW MAMSITFGLT KLFGIAGLSM
101: FVSVYTQYDI EIAQIKRDKE NNNIGGVGEE LAQREKLPNP FQAALASALA FSVGAVIPLL AAAFIRNYKI RLVVVAVVAT LTLLLFGGVG AVLGKTLVRK
201: SCIRVLIGGW MAMSITFGLT KLFGIAGLSM
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.