Factsheet for Solyc01g104800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc07g066170.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25190.1	Solyc07g066170.2.1	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076566	Potato	extracellular, plasma membrane, vacuole	71.22	90.68
Solyc01g105260.1.1	Tomato	extracellular, vacuole	66.83	86.16
Solyc01g104810.2.1	Tomato	plasma membrane	88.29	84.19
Solyc01g104820.2.1	Tomato	plasma membrane	74.15	70.05
VIT_12s0055g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.76	63.84
VIT_12s0055g00860.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.83	61.44
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	64.88	60.18
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	59.51	59.8
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	57.07	59.69
Solyc04g051180.1.1	Tomato	extracellular	46.83	58.18
KRH28884	Soybean	cytosol, peroxisome, vacuole	64.88	57.83
KRH42212	Soybean	plasma membrane	64.39	57.39
KRH58337	Soybean	plasma membrane	63.9	57.21
TraesCS2D01G588000.1	Wheat	cytosol, plasma membrane, vacuole	53.17	56.77
VIT_12s0055g00850.t01	Wine grape	cytosol, peroxisome, plasma membrane	57.56	55.92
Os04t0686800-01	Rice	cytosol, peroxisome, vacuole	56.1	55.29
Solyc01g104780.2.1	Tomato	nucleus, peroxisome, vacuole	57.07	55.19
KRH76566	Soybean	cytosol, peroxisome, vacuole	62.44	54.94
KRH42214	Soybean	extracellular	43.9	54.55
TraesCS2B01G610400.1	Wheat	cytosol, plasma membrane, vacuole	54.63	54.37
CDY15107	Canola	cytosol, peroxisome, plasma membrane	58.05	54.34
Bra013226.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.07	53.42
CDY52279	Canola	cytosol, peroxisome, plasma membrane	57.07	53.42
AT3G25190.1	Thale cress	cytosol, peroxisome, plastid	57.07	53.42
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	56.59	52.02
KRH42215	Soybean	cytosol, plastid, vacuole	58.05	51.97
Zm00001d002884_P001	Maize	cytosol, plasma membrane, vacuole	54.15	51.87
Zm00001d026679_P001	Maize	cytosol, peroxisome, vacuole	52.2	51.69
TraesCS2A01G434100.1	Wheat	cytosol, plasma membrane, vacuole	31.22	51.2
Solyc01g104830.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.24	50.49
KRH58340	Soybean	plasma membrane	57.56	50.0
TraesCS2D01G431900.1	Wheat	cytosol, plasma membrane, vacuole	51.22	50.0
TraesCS2A01G434000.1	Wheat	cytosol, plasma membrane, vacuole	50.73	49.52
TraesCS2B01G455100.1	Wheat	cytosol, plasma membrane, vacuole	50.73	49.52
TraesCS2B01G455200.1	Wheat	cytosol, plasma membrane, vacuole	50.73	49.52
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	43.41	49.44
TraesCS2D01G432000.1	Wheat	cytosol, plasma membrane, vacuole	50.73	49.06
TraesCS2B01G455300.1	Wheat	cytosol, plasma membrane, vacuole	50.73	49.06
TraesCS2A01G433900.1	Wheat	cytosol, plasma membrane, vacuole	50.24	49.05
TraesCS2A01G434200.1	Wheat	cytosol, plasma membrane, vacuole	50.24	49.05
TraesCS2B01G455000.1	Wheat	cytosol, plasma membrane, vacuole	42.44	47.8
EES11692	Sorghum	cytosol, peroxisome, vacuole	53.17	47.6
TraesCS2B01G454900.1	Wheat	cytosol, plasma membrane, vacuole	48.29	46.7
GSMUA_Achr10P...	Banana	plasma membrane	58.54	45.8
TraesCS4A01G209600.1	Wheat	plasma membrane	43.41	44.72
HORVU2Hr1G101180.2	Barley	cytosol	49.76	44.54
Os11t0161900-00	Rice	cytosol, nucleus, plasma membrane	42.93	42.51
TraesCS4D01G110600.1	Wheat	cytosol, plasma membrane, vacuole	44.39	41.18
HORVU4Hr1G020210.1	Barley	cytosol, peroxisome	44.39	40.62
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	44.39	38.4
KRH42211	Soybean	cytosol, plasma membrane, vacuole	38.54	37.62
TraesCS4B01G112900.1	Wheat	endoplasmic reticulum	44.39	33.83
Solyc02g068260.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.9	32.03

Protein Annotations

MapMan:24.2.12.3	InterPro:Ccc1_fam	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0005384
GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0034755	GO:GO:0071281
GO:GO:0071421	UniProt:K4B252	PFAM:PF01988	PANTHER:PTHR31851	PANTHER:PTHR31851:SF30	EnsemblPlantsGene:Solyc01g104800.2
EnsemblPlants:Solyc01g104800.2.1	TMHMM:TMhelix	UniParc:UPI0002768B86	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:93160628..93161486

Molecular Weight (calculated)

21733.8 Da

IEP (calculated)

9.259

GRAVY (calculated)

0.411

Length

205 amino acids

Sequence
(BLAST)

001: MAAQNHLQIT IPKENQTPEK DFDYSQRAQW LRAAVLGAND GLVSVASLMM GVGAVQENVK TMIITGFAGL FAGACSMAIG EFVSVYSQLD IERAQMKRDK
101: ATRGQDREHE QLPNPFQAAV ASSIAFSLGA IVPILAAAFI ANHKLRLAVI VAAVSLALVA FGGMGAFLGR SPMMKSCARV LIGGWMAMAI TFGLTKLIGS
201: TGLEM

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.