Subcellular Localization
min:
: max
Winner_takes_all: vacuole, peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076498 | Potato | plasma membrane | 94.81 | 92.63 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 65.57 | 70.2 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 62.74 | 68.56 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 62.74 | 68.56 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 62.74 | 68.56 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 62.26 | 68.04 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 62.26 | 68.04 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 64.15 | 67.66 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 64.15 | 67.66 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 64.15 | 67.66 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 61.79 | 67.53 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 63.68 | 67.5 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 63.21 | 67.0 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 63.21 | 67.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 63.21 | 67.0 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 60.85 | 66.15 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 60.85 | 65.82 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 61.32 | 65.0 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 66.04 | 64.52 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 63.21 | 63.81 |
| Solyc04g051180.1.1 | Tomato | extracellular | 44.81 | 57.58 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 55.19 | 57.07 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 57.08 | 56.28 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 41.51 | 55.35 |
| KRH10486 | Soybean | plasma membrane | 47.64 | 54.59 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 52.36 | 54.41 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 55.66 | 54.38 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 52.08 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 50.0 | 50.96 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 49.53 | 50.72 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 49.06 | 50.49 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 28.77 | 48.8 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 47.62 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 47.62 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 47.62 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 47.62 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 47.64 | 47.2 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 47.17 | 47.17 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 40.09 | 46.7 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 46.23 | 46.67 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 46.23 | 46.67 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 46.23 | 46.23 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 42.92 | 45.73 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 48.11 | 44.54 |
| GSMUA_Achr10P... | Banana | plasma membrane | 54.25 | 43.89 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 43.87 | 43.87 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 44.34 | 42.53 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 45.75 | 42.36 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 43.87 | 41.52 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 40.09 | 41.06 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 42.92 | 38.4 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.38 | 36.76 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 44.81 | 35.32 |
| Solyc02g068260.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 44.34 | 33.45 |
Protein Annotations
| MapMan:24.2.12.3 | InterPro:Ccc1_fam | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 |
| GO:GO:0071421 | UniProt:K4B250 | PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF6 | EnsemblPlantsGene:Solyc01g104780.2 |
| EnsemblPlants:Solyc01g104780.2.1 | TMHMM:TMhelix | UniParc:UPI0002768B84 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:-:93147806..93148649
Molecular Weight (calculated)
22395.6 Da
IEP (calculated)
8.951
GRAVY (calculated)
0.453
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MASITNIQEL STNQHDIEKQ STNMEVEIVD YSKRAQWLRA AVLGANDGLL STSSLMMGIG AIHQDSKSMI VTGMAGLVAG ACSMAIGEFV SVYSQYDIEM
101: SQIKRENAME LFEEKKKKLP SPLKAAGASA FAFAIGAIVP LLGAAFVKDY HVRLGVVVGV VSLALLGFGG LSAYLGKAPL VKSSLRVLIG GWLAMGITFG
201: FTKLVGVTGL YA
101: SQIKRENAME LFEEKKKKLP SPLKAAGASA FAFAIGAIVP LLGAAFVKDY HVRLGVVVGV VSLALLGFGG LSAYLGKAPL VKSSLRVLIG GWLAMGITFG
201: FTKLVGVTGL YA
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.