Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 87.88 | 87.0 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 84.34 | 83.5 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 79.8 | 81.03 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 80.3 | 79.5 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 74.75 | 75.51 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 70.2 | 65.57 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 71.21 | 64.98 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 71.21 | 64.98 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 62.63 | 60.78 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 56.06 | 57.81 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 63.64 | 57.53 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 58.08 | 55.83 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 58.08 | 55.56 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 57.58 | 54.81 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 58.59 | 54.21 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 33.84 | 53.6 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 56.06 | 52.86 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 56.06 | 52.86 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 56.06 | 52.86 |
| KRH10486 | Soybean | plasma membrane | 48.99 | 52.43 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.56 | 52.38 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 56.06 | 52.36 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.98 | 52.2 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 55.05 | 51.9 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.05 | 51.9 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 55.05 | 51.42 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 58.08 | 50.22 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 52.02 | 48.58 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 48.48 | 48.24 |
| GSMUA_Achr10P... | Banana | plasma membrane | 62.63 | 47.33 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 54.55 | 47.16 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 45.96 | 43.96 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 48.48 | 43.44 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 47.98 | 42.41 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 49.49 | 41.35 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 48.99 | 36.06 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:823468 | ProteinID:AEE77816.1 | EMBL:AK176079 | ArrayExpress:AT3G43660 | EnsemblPlantsGene:AT3G43660 |
| RefSeq:AT3G43660 | TAIR:AT3G43660 | RefSeq:AT3G43660-TAIR-G | EnsemblPlants:AT3G43660.1 | TAIR:AT3G43660.1 | Unigene:At.36246 |
| EMBL:BT010510 | ProteinID:CAB83067.1 | InterPro:Ccc1_fam | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0055072 |
| GO:GO:0071281 | GO:GO:0071421 | RefSeq:NP_189952.1 | PFAM:PF01988 | PO:PO:0000084 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF30 | UniProt:Q9M2C0 | TMHMM:TMhelix | UniParc:UPI000009D0D7 | : | : |
Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
Coordinates
chr3:+:15565224..15566047
Molecular Weight (calculated)
20944.9 Da
IEP (calculated)
9.442
GRAVY (calculated)
0.511
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.