Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 100.0 | 59.52 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 100.0 | 59.52 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 100.0 | 59.52 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 100.0 | 59.52 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 98.4 | 58.02 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 96.8 | 52.84 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 80.0 | 48.31 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 80.0 | 48.08 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 80.0 | 46.73 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 82.4 | 44.98 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 51.2 | 39.75 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 63.2 | 38.73 |
| KRH42214 | Soybean | extracellular | 49.6 | 37.58 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 56.8 | 36.6 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 56.8 | 36.6 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 57.6 | 36.18 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 56.0 | 36.08 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 56.0 | 36.08 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 56.0 | 36.08 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 56.0 | 36.08 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 57.6 | 36.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 57.6 | 36.0 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 45.6 | 35.85 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.0 | 35.71 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 54.4 | 34.87 |
| KRH35158 | Soybean | plasma membrane | 55.2 | 34.85 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.2 | 34.5 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.2 | 34.5 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 57.6 | 34.29 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 53.6 | 33.84 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 54.4 | 33.83 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 54.4 | 33.83 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 54.4 | 33.83 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 53.6 | 33.5 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 56.0 | 31.96 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 57.6 | 31.72 |
| VIT_18s0076g00320.t01 | Wine grape | cytosol, peroxisome, vacuole | 56.0 | 31.67 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 55.2 | 31.51 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.0 | 31.25 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 51.2 | 31.22 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.4 | 31.05 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 54.4 | 31.05 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 52.8 | 30.99 |
| Solyc04g051180.1.1 | Tomato | extracellular | 40.8 | 30.91 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 53.6 | 30.59 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 54.4 | 30.49 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 56.8 | 30.47 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 52.0 | 30.23 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 50.4 | 30.0 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 55.2 | 30.0 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 52.0 | 29.95 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 52.8 | 29.86 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 51.2 | 29.77 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 51.2 | 29.49 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 51.2 | 29.36 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.2 | 28.87 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 48.8 | 28.77 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 53.6 | 28.76 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 49.6 | 28.57 |
| KRH42212 | Soybean | plasma membrane | 52.0 | 28.26 |
| GSMUA_Achr10P... | Banana | plasma membrane | 59.2 | 28.24 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 44.0 | 28.06 |
| TraesCS6A01G238800.1 | Wheat | cytosol | 52.0 | 28.02 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 51.2 | 27.95 |
| KRH58337 | Soybean | plasma membrane | 51.2 | 27.95 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 45.6 | 27.01 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 48.0 | 26.91 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 49.6 | 26.27 |
| KRH58340 | Soybean | plasma membrane | 48.8 | 25.85 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 30.4 | 21.11 |
| KRH10486 | Soybean | plasma membrane | 30.4 | 20.54 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 33.6 | 20.0 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 32.0 | 19.42 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 30.4 | 18.63 |
| Bra016431.1-P | Field mustard | cytosol | 15.2 | 17.27 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G434100.1 | EnsemblPlantsGene:TraesCS2A01G434100 | InterPro:Ccc1_fam | ncoils:Coil | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 |
| PFAM:PF01988 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : |
Description
No Description!
Coordinates
chr2A:-:686810070..686811183
Molecular Weight (calculated)
12538.5 Da
IEP (calculated)
8.499
GRAVY (calculated)
0.911
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGEYVSVC SQRDVEIAEL DQAGKRGGDE EKALPSPAQA AAASALAFSV GALLPLLAAG FIVGYNLRVA VVVVVATLAL AAFGCVGAVL GRAPVARSCA
101: RVVVGGLAAM AVTFGFMRLF RASGV
101: RVVVGGLAAM AVTFGFMRLF RASGV
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.