Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42215 | Soybean | cytosol, plastid, vacuole | 85.59 | 88.21 |
| KRH42214 | Soybean | extracellular | 58.05 | 83.03 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 72.88 | 77.13 |
| KRH35158 | Soybean | plasma membrane | 50.42 | 60.1 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 55.08 | 58.82 |
| KRH42212 | Soybean | plasma membrane | 57.2 | 58.7 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 48.73 | 58.67 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 50.0 | 57.56 |
| KRH58337 | Soybean | plasma membrane | 55.51 | 57.21 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 49.15 | 56.86 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 52.54 | 56.62 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 54.66 | 56.09 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 52.97 | 56.05 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 49.58 | 55.71 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 50.0 | 55.4 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 50.42 | 55.35 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 52.12 | 54.91 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 50.0 | 54.88 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 53.81 | 54.51 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 53.81 | 54.51 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 50.42 | 54.34 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.07 | 54.17 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 36.86 | 54.04 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 49.58 | 53.92 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 50.0 | 53.88 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 50.0 | 53.88 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 49.58 | 53.42 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 47.03 | 53.37 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 49.15 | 53.21 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 48.73 | 53.0 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 45.76 | 52.17 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 46.61 | 52.13 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 45.34 | 51.94 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.54 | 51.88 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 47.03 | 51.87 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 34.32 | 50.94 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 38.98 | 50.55 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.92 | 50.48 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 44.92 | 50.48 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 44.92 | 50.48 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.49 | 49.53 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 44.49 | 49.53 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 44.07 | 49.52 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 44.07 | 49.52 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 44.07 | 49.52 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 25.85 | 48.8 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 46.61 | 48.03 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 42.37 | 47.17 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 35.59 | 46.67 |
| KRH10486 | Soybean | plasma membrane | 36.44 | 46.49 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 37.71 | 44.72 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 43.22 | 44.54 |
| GSMUA_Achr10P... | Banana | plasma membrane | 49.15 | 44.27 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 39.83 | 42.53 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 36.86 | 42.03 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 39.83 | 41.96 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 34.32 | 39.32 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 38.56 | 38.4 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 32.63 | 37.75 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 32.63 | 36.67 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 41.53 | 36.43 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:547974 | EMBL:ACUP02003252 | InterPro:Ccc1_fam | EnsemblPlantsGene:GLYMA_05G121600 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0006880 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009399 | GO:GO:0009877 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 |
| GO:GO:0071421 | UniProt:I1K2T1 | EnsemblPlants:KRH58340 | ProteinID:KRH58340 | ProteinID:KRH58340.1 | PFAM:PF01988 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF6 | TMHMM:TMhelix | UniParc:UPI00023C45C2 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:-:31433121..31434056
Molecular Weight (calculated)
24875.0 Da
IEP (calculated)
9.007
GRAVY (calculated)
0.524
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVVSPKMAN ATPNGSVPHN HVGAVLLTIP TIKIDGKQTL ATEDHTSIDY LQRAQWLRAA ILGANDGLVS VASLMMGVGA VKRDAKAMLL AGFAGLVAGA
101: CGMAIGEFVA VYTQYEVEVG QMKRDMNMSV GGERDLEMEM ERRTLPNPLQ ATLASALCFS IGALVPLLSA AFIENYRTRI IVVVAMSCLA LVVFGWVGAK
201: LGKTPKLKSC VRFLLGGCIA MSITFGSTKL LGASAL
101: CGMAIGEFVA VYTQYEVEVG QMKRDMNMSV GGERDLEMEM ERRTLPNPLQ ATLASALCFS IGALVPLLSA AFIENYRTRI IVVVAMSCLA LVVFGWVGAK
201: LGKTPKLKSC VRFLLGGCIA MSITFGSTKL LGASAL
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.