Factsheet for TraesCS4D01G110600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plasma membrane, vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS4A01G499900.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G000300.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G000200.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25190.1	TraesCS4A01G499900.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS7A01G000300.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS7D01G000200.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS2A01G331000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS2B01G351300.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS2D01G332000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5A01G257000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5B01G256500.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5D01G265600.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7A01G240200.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7B01G135800.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7D01G238200.1	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G209600.1	Wheat	plasma membrane	88.24	97.99
HORVU4Hr1G020210.1	Barley	cytosol, peroxisome	96.38	95.09
TraesCS4B01G112900.1	Wheat	endoplasmic reticulum	98.19	80.67
Os11t0161900-00	Rice	cytosol, nucleus, plasma membrane	59.28	63.28
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	65.61	61.18
TraesCS2D01G588000.1	Wheat	cytosol, plasma membrane, vacuole	47.51	54.69
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	49.77	53.92
TraesCS2D01G431900.1	Wheat	cytosol, plasma membrane, vacuole	49.77	52.38
CDY45946	Canola	cytosol, peroxisome, vacuole	45.25	51.55
Bra008277.1-P	Field mustard	cytosol, peroxisome, vacuole	45.25	51.55
TraesCS2D01G432000.1	Wheat	cytosol, plasma membrane, vacuole	49.32	51.42
CDY20388	Canola	cytosol, peroxisome, vacuole	44.8	51.03
KRH35158	Soybean	plasma membrane	45.7	51.01
CDX87566	Canola	cytosol, peroxisome, vacuole	44.34	50.52
CDY33672	Canola	cytosol, peroxisome, vacuole	44.34	50.26
Bra015718.1-P	Field mustard	cytosol, peroxisome, vacuole	43.89	50.0
AT1G76800.1	Thale cress	cytosol, peroxisome, plasma membrane	44.34	50.0
CDX88318	Canola	cytosol, peroxisome, vacuole	43.89	50.0
Bra012271.1-P	Field mustard	cytosol, peroxisome, vacuole	44.8	49.5
CDY71883	Canola	cytosol, peroxisome, vacuole	44.8	49.5
AT1G21140.1	Thale cress	cytosol, peroxisome, plasma membrane	44.34	49.0
CDX96601	Canola	cytosol, peroxisome, vacuole	44.34	49.0
AT3G43630.1	Thale cress	cytosol, peroxisome, plasma membrane	43.89	48.5
AT3G43660.1	Thale cress	cytosol, peroxisome, vacuole	43.44	48.48
CDY29473	Canola	cytosol, peroxisome, vacuole	43.89	48.26
CDY04601	Canola	cytosol, peroxisome, vacuole	43.89	48.26
Bra025879.1-P	Field mustard	cytosol, peroxisome, vacuole	43.89	48.26
Solyc04g051180.1.1	Tomato	extracellular	35.29	47.27
Bra016431.1-P	Field mustard	cytosol	23.53	47.27
CDY01332	Canola	cytosol, peroxisome, vacuole	44.8	47.14
VIT_12s0055g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.51	46.88
VIT_18s0076g00320.t01	Wine grape	cytosol, peroxisome, vacuole	46.61	46.61
KRG91640	Soybean	cytosol, peroxisome, vacuole	46.15	46.58
KRH43941	Soybean	cytosol, peroxisome, vacuole	45.7	46.54
KRH08706	Soybean	cytosol, peroxisome, vacuole	47.51	45.06
KRH42214	Soybean	extracellular	33.48	44.85
VIT_12s0055g00860.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.25	44.84
Solyc01g104820.2.1	Tomato	plasma membrane	43.89	44.7
PGSC0003DMT400008929	Potato	cytosol, peroxisome, vacuole	45.7	44.49
Solyc01g104800.2.1	Tomato	cytosol, peroxisome, plasma membrane	41.18	44.39
Solyc01g104780.2.1	Tomato	nucleus, peroxisome, vacuole	42.53	44.34
KRH42215	Soybean	cytosol, plastid, vacuole	45.7	44.1
PGSC0003DMT400076561	Potato	cytosol, peroxisome, plasma membrane	43.44	44.04
PGSC0003DMT400076498	Potato	plasma membrane	42.99	43.78
TraesCS6D01G221100.1	Wheat	cytosol, peroxisome, vacuole	45.7	43.72
Solyc01g104810.2.1	Tomato	plasma membrane	42.53	43.72
KRH70313	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.06	43.51
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	43.89	43.5
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	43.44	43.44
PGSC0003DMT400076567	Potato	plasma membrane	41.18	43.33
PGSC0003DMT400076565	Potato	plasma membrane	42.08	43.26
PGSC0003DMT400032701	Potato	plasma membrane	41.63	43.19
CDY15107	Canola	cytosol, peroxisome, plasma membrane	42.53	42.92
PGSC0003DMT400076566	Potato	extracellular, plasma membrane, vacuole	31.22	42.86
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	38.01	42.86
Bra013226.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.08	42.47
CDY52279	Canola	cytosol, peroxisome, plasma membrane	42.08	42.47
TraesCS2D01G384100.1	Wheat	cytosol, peroxisome, vacuole	44.34	42.42
KRH58337	Soybean	plasma membrane	43.89	42.36
TraesCS2D01G383900.1	Wheat	cytosol, peroxisome, vacuole	43.89	41.99
KRH28884	Soybean	cytosol, peroxisome, vacuole	43.44	41.74
KRH10486	Soybean	plasma membrane	34.84	41.62
KRH42212	Soybean	plasma membrane	42.99	41.3
VIT_12s0055g00850.t01	Wine grape	cytosol, peroxisome, plasma membrane	39.37	41.23
AT3G25190.1	Thale cress	cytosol, peroxisome, plastid	40.72	41.1
GSMUA_Achr10P...	Banana	plasma membrane	47.51	40.08
KRH58340	Soybean	plasma membrane	42.53	39.83
KRH76566	Soybean	cytosol, peroxisome, vacuole	41.63	39.48
Solyc01g105260.1.1	Tomato	extracellular, vacuole	28.05	38.99
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	30.77	37.78
KRH42211	Soybean	cytosol, plasma membrane, vacuole	30.32	31.9
PGSC0003DMT400076558	Potato	cytosol, peroxisome, plasma membrane	28.96	31.07
Solyc01g104830.2.1	Tomato	cytosol, peroxisome, plasma membrane	27.15	29.41

Protein Annotations

EnsemblPlants:TraesCS4D01G110600.1	EnsemblPlantsGene:TraesCS4D01G110600	InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF5	PFAM:PF01988
SEG:seg	TMHMM:TMhelix	MapMan:24.2.12.3	:	:	:

Description

No Description!

Coordinates

chr4D:-:91059919..91060584

Molecular Weight (calculated)

22019.8 Da

IEP (calculated)

7.453

GRAVY (calculated)

0.556

Length

221 amino acids

Sequence
(BLAST)

001: MATDNDTKLA VAELGPTPAP EGMKLCTVCV ATATHDAMSL PSQQGQWLRA AVLGASDGLV STSALMLGIG AARPADPRAA LLSGVAGLVA GACSMAIGEY
101: VSVHAQLDVE LAGLQRLEEA RGYPADRAGL PNPCHASAAS ALSFAAGAAI PLLAAWFVAS YAVRVAVVVA TATLALAVFG ALGAVQGRAP GGRAGLRAAL
201: GGLVAMGVTY GLMKLFRTHS D

Best Arabidopsis Sequence Match ( AT1G21140.1 )
(BLAST)

001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL

Arabidopsis Description

Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.