Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G238800.1 | Wheat | cytosol | 92.64 | 92.24 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 92.21 | 92.21 |
| HORVU6Hr1G061000.1 | Barley | extracellular | 92.64 | 81.68 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 40.26 | 72.66 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 53.25 | 66.85 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 48.05 | 66.07 |
| Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 65.37 | 64.81 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 53.25 | 64.74 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 64.5 | 64.5 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 63.64 | 63.64 |
| EES05823 | Sorghum | plastid | 64.07 | 63.25 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 59.31 | 58.55 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 45.89 | 55.21 |
| OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 45.45 | 54.12 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 45.45 | 50.0 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.59 | 48.58 |
| OQU85754 | Sorghum | plastid | 64.07 | 47.9 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 43.72 | 45.7 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G221100.1 | EnsemblPlantsGene:TraesCS6D01G221100 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:311582076..311582771
Molecular Weight (calculated)
22679.0 Da
IEP (calculated)
7.413
GRAVY (calculated)
0.366
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPADLSSRV HAAADAAPKS PAEPKQEEIS PAAADVEAGG GSPGGDGVNY VARAQWLRAA VLGANDGLVT VASLMIGVGA VNESRRAMLV SGVAGLVSGA
101: CSMAIGEFVS VYAQYDIEVA QIKRTRRDDG DGGSGDRSSL PSPTMGAGAS ALAFATGAAL PLLSGGFVRT WAGRVAAVCA ASSVGLAGFG VLGAYLGGAS
201: AVRSGARVLV GGWLAMATTY GALKLFGVHG A
101: CSMAIGEFVS VYAQYDIEVA QIKRTRRDDG DGGSGDRSSL PSPTMGAGAS ALAFATGAAL PLLSGGFVRT WAGRVAAVCA ASSVGLAGFG VLGAYLGGAS
201: AVRSGARVLV GGWLAMATTY GALKLFGVHG A
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.