Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 96.54 | 96.54 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 96.97 | 94.92 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 94.81 | 92.8 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 51.52 | 70.83 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 54.98 | 69.02 |
| Zm00001d002820_P001 | Maize | plastid | 70.13 | 66.12 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 54.11 | 65.79 |
| EES12569 | Sorghum | cytosol | 71.86 | 65.35 |
| TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 63.64 | 63.64 |
| Zm00001d025949_P001 | Maize | vacuole | 69.26 | 62.26 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 64.07 | 59.92 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 59.74 | 58.97 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.59 | 53.65 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 45.45 | 50.0 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 44.59 | 48.58 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 41.99 | 43.89 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G383900.1 | EnsemblPlantsGene:TraesCS2D01G383900 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:488363751..488364446
Molecular Weight (calculated)
23377.2 Da
IEP (calculated)
6.391
GRAVY (calculated)
0.467
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHVGSSHV HADGERRAKE EDVVVVLAVD AEAAEADDHP GDDDGGVNYM ARAQWLRAAV LGANDGLVSV ASLMIGVSAV NDAGKTMLVS GLAGLVAGAC
101: SMAIGEFVSV YAQYDIEVAQ IKRDGAKGKK ESLASPTLAA LASALAFAVG ALLPLLAGGF VRPYGARVGA VCAATTVGLA GFGAAGGYLG GASMLRSGSR
201: VLLGGWVAMA VTYGVLWLFA KVSHIHVSSL R
101: SMAIGEFVSV YAQYDIEVAQ IKRDGAKGKK ESLASPTLAA LASALAFAVG ALLPLLAGGF VRPYGARVGA VCAATTVGLA GFGAAGGYLG GASMLRSGSR
201: VLLGGWVAMA VTYGVLWLFA KVSHIHVSSL R
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.