Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002820_P001 | Maize | plastid | 90.94 | 94.29 |
| Zm00001d025949_P001 | Maize | vacuole | 88.58 | 87.55 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 49.21 | 74.4 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 52.36 | 72.28 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 65.35 | 71.86 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 64.96 | 71.43 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 66.14 | 71.19 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 52.36 | 70.0 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 64.57 | 69.49 |
| EES05823 | Sorghum | plastid | 57.09 | 61.97 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 55.51 | 60.26 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 57.87 | 59.51 |
| OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 41.34 | 54.12 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 43.31 | 48.03 |
| OQU85754 | Sorghum | plastid | 57.87 | 47.57 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 38.19 | 40.93 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:8055917 | UniProt:C5YCZ5 | InterPro:Ccc1_fam | EnsemblPlants:EES12569 | ProteinID:EES12569 |
| ProteinID:EES12569.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0071281 | GO:GO:0071421 |
| PFAM:PF01988 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | EnsemblPlantsGene:SORBI_3006G161800 | TMHMM:TMhelix | UniParc:UPI0001A87490 |
| RefSeq:XP_002448241.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:51951834..51953383
Molecular Weight (calculated)
25476.6 Da
IEP (calculated)
4.437
GRAVY (calculated)
0.568
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPHLSSQVH ATAAAAASAF PNGKKVESDV LPPPGVVILD VEAGAPTNAA GVADPRDVDD GDDAGVDYMA RAQWLRAAVL GANDGLVSVA SLMIGVGAVS
101: ATRKAMLVSG LAGLVAGACS MAIGEFVSVY AQYDIEVSQI KRDGGGEDEE EGARDSLPSP TQAAVASALA FAFGALLPLL AGVFIPSWAA RVAAVCAATS
201: VGLAGFGVAG AYLGGASMLR SGLRVLLGGW FAMLVTFGVL RLFGTVFHIQ VSSA
101: ATRKAMLVSG LAGLVAGACS MAIGEFVSVY AQYDIEVSQI KRDGGGEDEE EGARDSLPSP TQAAVASALA FAFGALLPLL AGVFIPSWAA RVAAVCAATS
201: VGLAGFGVAG AYLGGASMLR SGLRVLLGGW FAMLVTFGVL RLFGTVFHIQ VSSA
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.