CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
golgi 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87676
EER96942
EES14314
OQU81760

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25190.1	EER87676	AT1G01010.1	21798944
AT3G25190.1	EER96942	AT4G26455.1	21798944
AT3G25190.1	EES14314	AT4G26455.1	21798944
AT3G25190.1	OQU81760	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002884_P001	Maize	cytosol, plasma membrane, vacuole	87.34	93.46
TraesCS2A01G434100.1	Wheat	cytosol, plasma membrane, vacuole	44.98	82.4
TraesCS2D01G588000.1	Wheat	cytosol, plasma membrane, vacuole	67.69	80.73
Os04t0686800-01	Rice	cytosol, peroxisome, vacuole	72.49	79.81
TraesCS2B01G610400.1	Wheat	cytosol, plasma membrane, vacuole	70.74	78.64
TraesCS2A01G434000.1	Wheat	cytosol, plasma membrane, vacuole	71.62	78.1
TraesCS2B01G455200.1	Wheat	cytosol, plasma membrane, vacuole	71.18	77.62
TraesCS2D01G431900.1	Wheat	cytosol, plasma membrane, vacuole	70.74	77.14
TraesCS2B01G455100.1	Wheat	cytosol, plasma membrane, vacuole	70.74	77.14
TraesCS2B01G455300.1	Wheat	cytosol, plasma membrane, vacuole	70.74	76.42
TraesCS2B01G455000.1	Wheat	cytosol, plasma membrane, vacuole	60.7	76.37
TraesCS2A01G433900.1	Wheat	cytosol, plasma membrane, vacuole	69.87	76.19
TraesCS2A01G434200.1	Wheat	cytosol, plasma membrane, vacuole	69.87	76.19
TraesCS2D01G432000.1	Wheat	cytosol, plasma membrane, vacuole	70.31	75.94
TraesCS2B01G454900.1	Wheat	cytosol, plasma membrane, vacuole	63.76	68.87
HORVU2Hr1G101180.2	Barley	cytosol	65.5	65.5
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	58.08	65.2
CDX88318	Canola	cytosol, peroxisome, vacuole	53.71	63.4
Bra015718.1-P	Field mustard	cytosol, peroxisome, vacuole	53.71	63.4
CDX87566	Canola	cytosol, peroxisome, vacuole	53.28	62.89
CDY45946	Canola	cytosol, peroxisome, vacuole	53.28	62.89
Bra008277.1-P	Field mustard	cytosol, peroxisome, vacuole	53.28	62.89
CDY20388	Canola	cytosol, peroxisome, vacuole	52.4	61.86
AT1G76800.1	Thale cress	cytosol, peroxisome, plasma membrane	52.84	61.73
Bra012271.1-P	Field mustard	cytosol, peroxisome, vacuole	53.71	61.5
CDY71883	Canola	cytosol, peroxisome, vacuole	53.28	61.0
AT1G21140.1	Thale cress	cytosol, peroxisome, plasma membrane	52.4	60.0
Bra016431.1-P	Field mustard	cytosol	28.38	59.09
CDY01332	Canola	cytosol, peroxisome, vacuole	53.71	58.57
CDY29473	Canola	cytosol, peroxisome, vacuole	51.09	58.21
CDY04601	Canola	cytosol, peroxisome, vacuole	51.09	58.21
Bra025879.1-P	Field mustard	cytosol, peroxisome, vacuole	51.09	58.21
AT3G43660.1	Thale cress	cytosol, peroxisome, vacuole	50.22	58.08
AT3G43630.1	Thale cress	cytosol, peroxisome, plasma membrane	50.66	58.0
KRH35158	Soybean	plasma membrane	49.78	57.58
CDY33672	Canola	cytosol, peroxisome, vacuole	48.47	56.92
Solyc04g051180.1.1	Tomato	extracellular	40.61	56.36
VIT_18s0076g00320.t01	Wine grape	cytosol, peroxisome, vacuole	54.15	56.11
CDX96601	Canola	cytosol, peroxisome, vacuole	48.91	56.0
PGSC0003DMT400008929	Potato	cytosol, peroxisome, vacuole	54.59	55.07
KRG91640	Soybean	cytosol, peroxisome, vacuole	52.4	54.79
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	46.29	54.08
Solyc01g104800.2.1	Tomato	cytosol, peroxisome, plasma membrane	47.6	53.17
VIT_12s0055g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.97	53.12
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	51.09	52.94
KRH08706	Soybean	cytosol, peroxisome, vacuole	53.71	52.79
PGSC0003DMT400032701	Potato	plasma membrane	48.91	52.58
PGSC0003DMT400076566	Potato	extracellular, plasma membrane, vacuole	36.68	52.17
Solyc01g104810.2.1	Tomato	plasma membrane	48.47	51.63
KRH42214	Soybean	extracellular	37.12	51.52
PGSC0003DMT400076565	Potato	plasma membrane	48.03	51.16
CDY15107	Canola	cytosol, peroxisome, plasma membrane	48.91	51.14
VIT_12s0055g00860.t01	Wine grape	cytosol, peroxisome, plasma membrane	49.78	51.12
PGSC0003DMT400076567	Potato	plasma membrane	46.72	50.95
KRH28884	Soybean	cytosol, peroxisome, vacuole	51.09	50.87
Solyc01g104820.2.1	Tomato	plasma membrane	48.03	50.69
KRH70313	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.84	50.63
PGSC0003DMT400076561	Potato	cytosol, peroxisome, plasma membrane	48.03	50.46
KRH42212	Soybean	plasma membrane	50.66	50.43
KRH43941	Soybean	cytosol, peroxisome, vacuole	47.6	50.23
AT3G25190.1	Thale cress	cytosol, peroxisome, plastid	48.03	50.23
KRH42215	Soybean	cytosol, plastid, vacuole	50.22	50.22
KRH58337	Soybean	plasma membrane	50.22	50.22
CDY52279	Canola	cytosol, peroxisome, plasma membrane	47.6	49.77
Bra013226.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.6	49.77
GSMUA_Achr10P...	Banana	plasma membrane	56.77	49.62
KRH76566	Soybean	cytosol, peroxisome, vacuole	50.22	49.36
VIT_12s0055g00850.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.54	48.34
Solyc01g104780.2.1	Tomato	nucleus, peroxisome, vacuole	44.54	48.11
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	46.29	47.53
PGSC0003DMT400076498	Potato	plasma membrane	44.98	47.47
KRH58340	Soybean	plasma membrane	48.03	46.61
Solyc01g105260.1.1	Tomato	extracellular, vacuole	32.31	46.54
EES05823	Sorghum	plastid	47.16	46.15
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	47.16	45.57
OQU85755	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	37.55	44.33
KRH10486	Soybean	plasma membrane	35.37	43.78
EES12569	Sorghum	cytosol	48.03	43.31
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	32.75	41.67
PGSC0003DMT400076558	Potato	cytosol, peroxisome, plasma membrane	35.81	39.81
Solyc01g104830.2.1	Tomato	cytosol, peroxisome, plasma membrane	33.62	37.75
OQU85754	Sorghum	plastid	44.98	33.33
KRH42211	Soybean	cytosol, plasma membrane, vacuole	30.13	32.86

Protein Annotations

MapMan:24.2.12.3	EntrezGene:8055461	UniProt:C5YB14	InterPro:Ccc1_fam	EnsemblPlants:EES11692	ProteinID:EES11692
ProteinID:EES11692.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005381	GO:GO:0005384	GO:GO:0005575
GO:GO:0005623	GO:GO:0006810	GO:GO:0006880	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0030026	GO:GO:0034755	GO:GO:0071281	GO:GO:0071421
PFAM:PF01988	PANTHER:PTHR31851	PANTHER:PTHR31851:SF30	EnsemblPlantsGene:SORBI_3006G276300	TMHMM:TMhelix	UniParc:UPI0001A87080
RefSeq:XP_002447364.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:60722232..60723789

Molecular Weight (calculated)

23044.1 Da

IEP (calculated)

4.763

GRAVY (calculated)

0.595

Length

229 amino acids

Sequence
(BLAST)

001: MAMMSSMDGG SNNIIGKQVS TVVDAENPAT TIVVGAPPCA VVVDSDDDDD DLSQRGNWLR AAVLGANDGL VSTASLMLGV GAVKADARAM VISGFAGLLA
101: GACSMAIGEF VSVCSQREVE LARLDRDGKR GGEEEKALPS PVQAAAASAL AFSVGALLPL LAAGFIADYR LRIGVVAAVA TATLAAFGCV GAVLGRAPVA
201: RSCARVVVGG WVAMAVTFGL MRLFKASGI

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.