Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- golgi 1
- mitochondrion 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35158 | Soybean | plasma membrane | 72.4 | 80.81 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 77.83 | 78.54 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 79.64 | 75.54 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 76.92 | 74.89 |
| Solyc04g051180.1.1 | Tomato | extracellular | 55.2 | 73.94 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 78.28 | 72.38 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.33 | 67.41 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 67.87 | 67.26 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 61.09 | 66.18 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 52.04 | 59.9 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 54.75 | 58.45 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 54.3 | 58.25 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 55.2 | 57.01 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 53.39 | 56.73 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 31.67 | 56.0 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 53.39 | 55.92 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 52.04 | 54.76 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 52.04 | 54.76 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 52.04 | 54.76 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 51.58 | 54.29 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 56.11 | 54.15 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 51.58 | 53.77 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 53.33 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 43.89 | 53.3 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 52.83 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 49.32 | 51.42 |
| GSMUA_Achr10P... | Banana | plasma membrane | 59.28 | 50.0 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 44.8 | 49.75 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 50.23 | 48.47 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 46.61 | 46.61 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 43.44 | 46.38 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 46.61 | 45.98 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 48.42 | 45.15 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 47.51 | 39.03 |
| VIT_04s0044g01960.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 42.99 | 31.67 |
Protein Annotations
| EntrezGene:100263270 | wikigene:100263270 | MapMan:24.2.12.3 | ProteinID:CCB45137 | ProteinID:CCB45137.1 | InterPro:Ccc1_fam |
| ncoils:Coil | UniProt:F6GYV1 | EMBL:FN594974 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006880 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 |
| GO:GO:0071281 | GO:GO:0071421 | EntrezGene:LOC100263270 | wikigene:LOC100263270 | PFAM:PF01988 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF30 | TMHMM:TMhelix | UniParc:UPI00019859C2 | ArrayExpress:VIT_18s0076g00320 | EnsemblPlantsGene:VIT_18s0076g00320 | EnsemblPlants:VIT_18s0076g00320.t01 |
| RefSeq:XP_002265452 | RefSeq:XP_002265452.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr18:-:16184531..16185243
Molecular Weight (calculated)
23365.4 Da
IEP (calculated)
5.996
GRAVY (calculated)
0.290
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNQPSLHD PKFTVPISDV EQQASQLENE AKEFDYSKRS QWLRAAVLGA NDGLVSTASL MMGVGAVKQD IKAMILTGFA GLVAGACSMA IGEFVSVYSQ
101: LDIEVAQRKR DKRRVGSGES EEEEGEKENL PNPVQAAAAS ALAFAVGAMV PLLAASFIRE YKVRLGAVIA AVTVALVVFG WLGAVLGKVP AFRSCMRVLV
201: GGWLAMAITF GLTKLIGSSG L
101: LDIEVAQRKR DKRRVGSGES EEEEGEKENL PNPVQAAAAS ALAFAVGAMV PLLAASFIRE YKVRLGAVIA AVTVALVVFG WLGAVLGKVP AFRSCMRVLV
201: GGWLAMAITF GLTKLIGSSG L
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]
SUBAcon: [cytosol,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.