Factsheet for TraesCS4A01G209600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS4A01G499900.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G000300.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G000200.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G25190.1	TraesCS4A01G499900.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS7A01G000300.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS7D01G000200.1	AT1G01010.1	21798944
AT3G25190.1	TraesCS2A01G331000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS2B01G351300.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS2D01G332000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5A01G257000.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5B01G256500.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS5D01G265600.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7A01G240200.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7B01G135800.1	AT4G26455.1	21798944
AT3G25190.1	TraesCS7D01G238200.1	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G110600.1	Wheat	cytosol, plasma membrane, vacuole	97.99	88.24
HORVU4Hr1G020210.1	Barley	cytosol, peroxisome	95.98	85.27
TraesCS4B01G112900.1	Wheat	endoplasmic reticulum	98.49	72.86
Os11t0161900-00	Rice	cytosol, nucleus, plasma membrane	62.81	60.39
TraesCS2A01G434100.1	Wheat	cytosol, plasma membrane, vacuole	36.18	57.6
OQU82931	Sorghum	cytosol, peroxisome, plastid, vacuole	67.34	56.54
Bra008277.1-P	Field mustard	cytosol, peroxisome, vacuole	49.75	51.03
CDY45946	Canola	cytosol, peroxisome, vacuole	49.75	51.03
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	52.26	50.98
CDY33672	Canola	cytosol, peroxisome, vacuole	49.75	50.77
CDX87566	Canola	cytosol, peroxisome, vacuole	49.25	50.52
CDY20388	Canola	cytosol, peroxisome, vacuole	49.25	50.52
TraesCS2A01G434000.1	Wheat	cytosol, plasma membrane, vacuole	53.27	50.48
Bra015718.1-P	Field mustard	cytosol, peroxisome, vacuole	48.74	50.0
TraesCS2A01G433900.1	Wheat	cytosol, plasma membrane, vacuole	52.76	50.0
CDX88318	Canola	cytosol, peroxisome, vacuole	48.74	50.0
TraesCS2A01G434200.1	Wheat	cytosol, plasma membrane, vacuole	52.76	50.0
Bra012271.1-P	Field mustard	cytosol, peroxisome, vacuole	49.75	49.5
CDY71883	Canola	cytosol, peroxisome, vacuole	49.75	49.5
KRH35158	Soybean	plasma membrane	49.25	49.49
AT1G76800.1	Thale cress	cytosol, peroxisome, plasma membrane	48.74	49.49
CDX96601	Canola	cytosol, peroxisome, vacuole	49.25	49.0
AT1G21140.1	Thale cress	cytosol, peroxisome, plasma membrane	49.25	49.0
AT3G43630.1	Thale cress	cytosol, peroxisome, plasma membrane	48.74	48.5
AT3G43660.1	Thale cress	cytosol, peroxisome, vacuole	48.24	48.48
CDY29473	Canola	cytosol, peroxisome, vacuole	48.74	48.26
CDY04601	Canola	cytosol, peroxisome, vacuole	48.74	48.26
Bra025879.1-P	Field mustard	cytosol, peroxisome, vacuole	48.74	48.26
CDY01332	Canola	cytosol, peroxisome, vacuole	49.75	47.14
Solyc04g051180.1.1	Tomato	extracellular	38.69	46.67
VIT_12s0055g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	52.26	46.43
Bra016431.1-P	Field mustard	cytosol	25.63	46.36
KRH43941	Soybean	cytosol, peroxisome, vacuole	49.75	45.62
KRG91640	Soybean	cytosol, peroxisome, vacuole	49.75	45.21
KRH42214	Soybean	extracellular	37.19	44.85
VIT_18s0076g00320.t01	Wine grape	cytosol, peroxisome, vacuole	49.75	44.8
KRH08706	Soybean	cytosol, peroxisome, vacuole	51.26	43.78
PGSC0003DMT400076566	Potato	extracellular, plasma membrane, vacuole	35.18	43.48
Solyc01g104800.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.72	43.41
Solyc01g104810.2.1	Tomato	plasma membrane	46.73	43.26
PGSC0003DMT400008929	Potato	cytosol, peroxisome, vacuole	49.25	43.17
Solyc01g104780.2.1	Tomato	nucleus, peroxisome, vacuole	45.73	42.92
PGSC0003DMT400076567	Potato	plasma membrane	45.23	42.86
PGSC0003DMT400076565	Potato	plasma membrane	46.23	42.79
KRH70313	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.26	42.68
VIT_12s0055g00860.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.74	42.6
KRH42213	Soybean	cytosol, endoplasmic reticulum, plasma membrane	47.24	42.53
PGSC0003DMT400076498	Potato	plasma membrane	46.23	42.4
Solyc01g104820.2.1	Tomato	plasma membrane	46.23	42.4
PGSC0003DMT400032701	Potato	plasma membrane	45.23	42.25
KRH58338	Soybean	cytosol, peroxisome, plasma membrane	41.21	41.84
PGSC0003DMT400076561	Potato	cytosol, peroxisome, plasma membrane	45.73	41.74
KRH58339	Soybean	cytosol, peroxisome, plasma membrane	46.73	41.7
CDY15107	Canola	cytosol, peroxisome, plasma membrane	45.73	41.55
KRH42215	Soybean	cytosol, plastid, vacuole	47.74	41.48
KRH58337	Soybean	plasma membrane	47.24	41.05
TraesCS6A01G238800.1	Wheat	cytosol	47.74	40.95
Bra013226.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.72	40.64
CDY52279	Canola	cytosol, peroxisome, plasma membrane	44.72	40.64
TraesCS2A01G387100.1	Wheat	cytosol, peroxisome, vacuole	47.74	40.25
AT3G25190.1	Thale cress	cytosol, peroxisome, plastid	44.22	40.18
KRH42212	Soybean	plasma membrane	46.23	40.0
KRH10486	Soybean	plasma membrane	37.19	40.0
KRH28884	Soybean	cytosol, peroxisome, vacuole	46.23	40.0
VIT_12s0055g00850.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.21	39.81
Solyc01g105260.1.1	Tomato	extracellular, vacuole	31.66	39.62
GSMUA_Achr10P...	Banana	plasma membrane	50.75	38.55
KRH76566	Soybean	cytosol, peroxisome, vacuole	44.22	37.77
KRH58340	Soybean	plasma membrane	44.72	37.71
KRH58336	Soybean	peroxisome, plasma membrane, vacuole	33.17	36.67
PGSC0003DMT400076558	Potato	cytosol, peroxisome, plasma membrane	31.16	30.1
KRH42211	Soybean	cytosol, plasma membrane, vacuole	31.66	30.0
Solyc01g104830.2.1	Tomato	cytosol, peroxisome, plasma membrane	29.15	28.43

Protein Annotations

EnsemblPlants:TraesCS4A01G209600.1	EnsemblPlantsGene:TraesCS4A01G209600	InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF5	PFAM:PF01988
SEG:seg	TMHMM:TMhelix	MapMan:24.2.12.3	:	:	:

Description

No Description!

Coordinates

chr4A:-:503235890..503236489

Molecular Weight (calculated)

19841.2 Da

IEP (calculated)

8.652

GRAVY (calculated)

0.634

Length

199 amino acids

Sequence
(BLAST)

001: MKLCTVCVAT ATHDAMSLPS QQGQWLRAAV LGASDGLVST SALMLGIGAA RPADPRAALL SGVAGLVAGA CSMAIGEYVS VHAQLDVELA GLQRLEEARG
101: YPADRAGLPN PCHASAASAL SFAAGAAIPL LAAWFVTSYG VRVAVVVATA TLALAAFGAL GAVQGRAPGG RAGLRAALGG LVAMAVTYGL MKLFRTHSD

Best Arabidopsis Sequence Match ( AT1G21140.1 )
(BLAST)

001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL

Arabidopsis Description

Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.