Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 92.24 | 92.64 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 90.09 | 90.48 |
| HORVU6Hr1G061000.1 | Barley | extracellular | 91.38 | 80.92 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 38.79 | 70.31 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 52.16 | 65.76 |
| Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 65.95 | 65.67 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 46.98 | 64.88 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 52.16 | 63.68 |
| EES05823 | Sorghum | plastid | 63.36 | 62.82 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 61.64 | 60.59 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 57.76 | 57.27 |
| OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 44.4 | 53.09 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 28.02 | 52.0 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 46.98 | 51.9 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 46.55 | 51.43 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 46.55 | 51.43 |
| OQU85754 | Sorghum | plastid | 63.79 | 47.9 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 40.95 | 47.74 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G238800.1 | EnsemblPlantsGene:TraesCS6A01G238800 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:448351256..448351954
Molecular Weight (calculated)
22656.1 Da
IEP (calculated)
8.698
GRAVY (calculated)
0.403
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPADLSSHV PAAADAAPKS LAKPKQEEIS PAAADVEAGG GSPGGDGVNY AARAQWLRAA VLGANDGLVS VASLMIGVGA VNESRRAMLV SGVAGLVSGA
101: CSMAIGEYVS VYAQYDIEVA QIKRTRRGQD GDGGSGDRSN LPSPTLAAGA SALAFAAGGA LPLLSGGFVR AWAGRVAAVC TASSVGLAGF GVLGAYLGGA
201: SAVRSGARVL VGGWLAMATT FGALKLFGVH AA
101: CSMAIGEYVS VYAQYDIEVA QIKRTRRGQD GDGGSGDRSN LPSPTLAAGA SALAFAAGGA LPLLSGGFVR AWAGRVAAVC TASSVGLAGF GVLGAYLGGA
201: SAVRSGARVL VGGWLAMATT FGALKLFGVH AA
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.