Factsheet for HORVU6Hr1G061000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G285700.1	Wheat	cytosol, peroxisome, vacuole	82.44	93.51
TraesCS6D01G221100.1	Wheat	cytosol, peroxisome, vacuole	81.68	92.64
TraesCS6A01G238800.1	Wheat	cytosol	80.92	91.38
Os02t0644200-01	Rice	cytosol, peroxisome	36.64	75.0
GSMUA_Achr11P...	Banana	extracellular, vacuole	47.33	67.39
Zm00001d017402_P001	Maize	cytosol, plasma membrane, plastid	59.54	66.95
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	42.75	66.67
GSMUA_Achr5P19910_001	Banana	mitochondrion	47.33	65.26
EES05823	Sorghum	plastid	56.49	63.25
GSMUA_Achr1P20190_001	Banana	plastid	52.29	58.55
OQU85755	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	38.93	52.58
OQU85754	Sorghum	plastid	58.78	49.84
HORVU4Hr1G020210.1	Barley	cytosol, peroxisome	38.55	45.09
HORVU2Hr1G101180.2	Barley	cytosol	39.31	44.98

Protein Annotations

EnsemblPlants:HORVU6Hr1G061000.1	EnsemblPlantsGene:HORVU6Hr1G061000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Ccc1_fam
PANTHER:PTHR31851	PANTHER:PTHR31851:SF32	PFAM:PF01988	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B477404	UniProt:A0A287UDA8	MapMan:24.2.12.3	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:407308264..407309212

Molecular Weight (calculated)

25596.5 Da

IEP (calculated)

5.912

GRAVY (calculated)

0.429

Length

262 amino acids

Sequence
(BLAST)

001: PGSHLHTSVL ALISLHLRCA ATMAPADLSS HVHAAADATP KSPAKPKQEE ISPAAAAVED DVEAGGGSLS PGGDGVDYVA RAQWLRAAVL GANDGLVTVA
101: SLMIGVGAVN ESKDAMLVSG VAGLVSGACS MAIGEFVSVY AQYDIEVAQI ERTRGGGDGD GNGGSGDKSN LPSPTLAAGA SAVAFAAGAA LPLLSGGFVR
201: TWAGRVAAVC AASSVGLAGF GVLGAYLGGA SVVRSGARVL VGGWLAMATT YGALKLFGVH SA

Best Arabidopsis Sequence Match ( AT3G43630.1 )
(BLAST)

001: MESHNTLNLD MEKDQEKAFD YSKRAQWLRA AVLGANDGLV STASLMMGVG AVKQNVKIMI LTGFAGLVAG ACSMAIGEFV SVYSQYDIEV AQMKRETGGE
101: IEKEKLPSPT QAAAASALAF SLGAMVPLLA AAFVKEYKVR IGAIVAAVTL ALVMFGWLGA VLGKAPVVKS SLRVLVGGWL AMAITYGFTK LIGSHSHMYV

Arabidopsis Description

Vacuolar iron transporter homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C3]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.