Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05823 | Sorghum | plastid | 79.4 | 79.06 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 40.77 | 74.22 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 51.5 | 71.43 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 55.79 | 70.65 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 55.79 | 68.42 |
| TraesCS6A01G238800.1 | Wheat | cytosol | 65.67 | 65.95 |
| TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 64.81 | 65.37 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 64.38 | 64.94 |
| Zm00001d002820_P001 | Maize | plastid | 65.24 | 62.04 |
| OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 51.5 | 61.86 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 60.52 | 60.26 |
| OQU85754 | Sorghum | plastid | 79.4 | 59.87 |
| HORVU6Hr1G061000.1 | Barley | extracellular | 66.95 | 59.54 |
| Zm00001d025949_P001 | Maize | vacuole | 64.81 | 58.75 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 45.49 | 51.21 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 45.92 | 50.0 |
Protein Annotations
| EnsemblPlants:Zm00001d017402_P001 | EnsemblPlants:Zm00001d017402_T001 | EnsemblPlantsGene:Zm00001d017402 | EntrezGene:103628775 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 | ProteinID:AQK73117.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002208303 | UniProt:A0A1D6HEP3 | MapMan:24.2.12.3 | : |
Description
Vacuolar iron transporter homolog 1
Coordinates
chr5:-:194980677..194981378
Molecular Weight (calculated)
23260.9 Da
IEP (calculated)
8.228
GRAVY (calculated)
0.421
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPNLSPDGP KFPSKPRRGG EADDVEAAAP AAAVHRPPVG RVDYLARAQW LRAAVLGAND GLVSVASLMI GVGAVNDGAR EMLVSGLAGL VAGACSMAIG
101: EFVSVYAQYD IQVAHSERGA RGGSDDDSSS SDGERLPSPT QAAAASALAF AVGAAVPLLS GGFVRPWAAR VAAVCAASSL GLAGFGAAGA YLGGASVVRS
201: GLRVLLGGWL AMAATFTILR LFGLAFKTHV VSA
101: EFVSVYAQYD IQVAHSERGA RGGSDDDSSS SDGERLPSPT QAAAASALAF AVGAAVPLLS GGFVRPWAAR VAAVCAASSL GLAGFGAAGA YLGGASVVRS
201: GLRVLLGGWL AMAATFTILR LFGLAFKTHV VSA
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.