Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 94.05 | 85.87 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 80.95 | 71.58 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 43.45 | 57.03 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 72.02 | 52.38 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 63.1 | 51.96 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 72.02 | 51.71 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 70.83 | 51.52 |
| Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 71.43 | 51.5 |
| EES05823 | Sorghum | plastid | 70.83 | 50.85 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 70.83 | 50.42 |
| Zm00001d002820_P001 | Maize | plastid | 73.21 | 50.2 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 70.24 | 50.0 |
| OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 57.14 | 49.48 |
| EES12569 | Sorghum | cytosol | 74.4 | 49.21 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 67.26 | 48.92 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 71.43 | 48.58 |
| TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 66.07 | 48.05 |
| TraesCS6A01G238800.1 | Wheat | cytosol | 64.88 | 46.98 |
| Zm00001d025949_P001 | Maize | vacuole | 70.24 | 45.91 |
| HORVU6Hr1G061000.1 | Barley | extracellular | 66.67 | 42.75 |
| GSMUA_Achr10P... | Banana | plasma membrane | 64.88 | 41.6 |
| OQU85754 | Sorghum | plastid | 70.24 | 38.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P03650_001 | EnsemblPlants:GSMUA_Achr11T03650_001 | EnsemblPlantsGene:GSMUA_Achr11G03650_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000296F789 | UniProt:M0RP45 | MapMan:24.2.12.3 | : | : | : |
Description
integral membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G03650_001]
Coordinates
chr11:+:2626004..2626588
Molecular Weight (calculated)
16474.5 Da
IEP (calculated)
8.751
GRAVY (calculated)
1.107
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAQWLRAV VLGANDGLVS VASLMVGVGA VGQSSKAMLV SGLAGLVAGA CSMAIGEFVS VYAQYDIEGS LPNPLLAAAA SALAFSLGAV LPLLAGAFIR
101: SGEVRVGVVC AVSSLGLAGF GAAGAVLGGA NVPNSVLRLL IGGWLAMLVT YGVLRVSGLV FGMHVSSG
101: SGEVRVGVVC AVSSLGLAGF GAAGAVLGGA NVPNSVLRLL IGGWLAMLVT YGVLRVSGLV FGMHVSSG
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.