Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- plasma membrane 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 48.58 | 71.43 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 51.82 | 69.57 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 51.82 | 67.37 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 59.92 | 64.07 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 59.92 | 64.07 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 32.79 | 63.28 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 60.32 | 63.14 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 59.11 | 61.86 |
| Zm00001d002820_P001 | Maize | plastid | 60.32 | 60.82 |
| EES12569 | Sorghum | cytosol | 59.51 | 57.87 |
| Zm00001d025949_P001 | Maize | vacuole | 59.51 | 57.2 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 52.63 | 55.56 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 41.3 | 49.04 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 36.84 | 43.96 |
Protein Annotations
| MapMan:24.2.12.3 | UniProt:A0A0P0WD18 | ProteinID:BAS90268.1 | InterPro:Ccc1_fam | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005381 | GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 |
| GO:GO:0055072 | GO:GO:0071281 | GO:GO:0071421 | EnsemblPlantsGene:Os04g0538400 | EnsemblPlants:Os04t0538400-01 | PFAM:PF01988 |
| PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | TMHMM:TMhelix | UniParc:UPI0000DD91CB | SEG:seg | : |
Description
Similar to Nodulin 21 (N-21). (Os04t0538400-01)
Coordinates
chr4:-:26931464..26932639
Molecular Weight (calculated)
26191.9 Da
IEP (calculated)
12.228
GRAVY (calculated)
0.062
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: LHVQVAQGGG SSRRRRRRRR RGGSSLHVVE GGRGRRRPER SRRRRRRWRR GRWRGVNYMA RAQWLRAAVL GANDGLVSVA SLMIGIGAVN ENNKAMLVSG
101: LAGLVAGACS MAIGEFVSVY AQYDIEVTQI ERDGDIDGAD AAAAREKLPS PTQAAFASAL AFAIGGLLPL LTSGFIKPWG PRVGVVCAAS SVGLAGFGAA
201: GGYLGGANMV RSGTRVLLGG WLAMLITYAV LRLFATIFHG MNISSSA
101: LAGLVAGACS MAIGEFVSVY AQYDIEVTQI ERDGDIDGAD AAAAREKLPS PTQAAFASAL AFAIGGLLPL LTSGFIKPWG PRVGVVCAAS SVGLAGFGAA
201: GGYLGGANMV RSGTRVLLGG WLAMLITYAV LRLFATIFHG MNISSSA
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.